<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03751

Description Uncharacterized protein
SequenceMGRYHDGKDLDTSSYPLVAVCIDKDKNSQNALKWAIDTLVQKGQIIVLVHDASGFKQPTDPHMRDLFLPFRCFCTRKDIQCKDVLLDDHDVAKSITEFSAVAAIEKLVVGATARGGFRFKADIPTTISKGAPDFCTVYVINKGKVSSVRNSTRQAPRVSPLRSQIQNMAAAAAKPEPAMAMAPTPQKWSSSSRGQDHAETPKVDSYIRSPFARGPMGGATRKSYADLSHLSMPDSADISFVSSGRRSVDHNPVPARLSAASAESYDHSFETSRTPWGGDSFGGNDHTSFSQSSTSSFCSLGMDDVETEMKRLRLELKQTMDMYSTACKEALNAKQKAMELQRWKAEEEQKTQDARLTEESAMALIEREKAKAKAAMDAAEASQRIAELEVQKRITAEKKLLKEAEDRKNRGGGMSHEIRYRRYSIEEIEHATDRFNDARKIGEGGYGPVYKGHLDHTAVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGGVGGGGPVIPWQHRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDVYSLGVMLLQIITAKPPMGLTHHVGRAMERGALADMLDPAVHDWPVEEAQCLAEMALRCCELRRKDRPDLGSSVLPELNRLRALGEDNMQFCGAMYSSSLLSAASRSQAEFMGDSQYPRSVFSSRTGESPMPPRRSNV
Length762
PositionTail
OrganismOryza punctata (Red rice)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.07
Grand average of hydropathy-0.446
Instability index48.45
Isoelectric point8.04
Molecular weight84158.71
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03751
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     211.35|      52|      56|     189|     244|       1
---------------------------------------------------------------------------
  154-  187 (40.31/18.15)	......QAP......RV.SPLRS.QIQN..MAAAAAKPEPAMAMAPTPQK.........
  193-  244 (93.12/58.44)	RGQDHAETP......KVDSYIRS.PFARGPMGGATRKSYADLSHLSMPDSADISFVSSG
  246-  301 (77.92/40.37)	RSVDHNPVParlsaaSAESYDHSfETSRTPWGG...DSFGGNDHTSFSQSSTSSFCSLG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.05|      16|     302|     306|     324|       2
---------------------------------------------------------------------------
  306-  321 (26.90/27.98)	ETEMKRLRLELKQ.TMD
  337-  353 (24.15/12.40)	AMELQRWKAEEEQkTQD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      80.40|      24|      26|     385|     409|       4
---------------------------------------------------------------------------
  365-  380 (15.80/ 7.62)	..........IEREKAKAKAAMDAAE
  385-  409 (32.17/31.24)	IAElEVQ.KRITAEKKLLKEAEDRKN
  414-  436 (32.42/25.34)	MSH.EIRyRRYSIEE..IEHATDRFN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.41|      11|      77|     439|     449|       5
---------------------------------------------------------------------------
  439-  449 (23.14/14.19)	RKIGEGGYGPV
  519-  529 (23.27/14.31)	RRGGVGGGGPV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03751 with Med32 domain of Kingdom Viridiplantae
Unable to open file!