Description | Mediator of RNA polymerase II transcription subunit 7 |
Sequence | MATSSAYPPPPPYYRFYKDYENDPSSAPEPPPPVDGPYQLFGATYTIDVVLPSLEDQGVRQLYPKSPDIGAEDPEQRASAPYFGASRYFSGETITAIATLIHMLKNQIQRWKQAIEDIKQRREEAQKLLGESLLILDGNQPSLPAM |
Length | 146 |
Position | Middle |
Organism | Oryza punctata (Red rice) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza. |
Aromaticity | 0.10 |
Grand average of hydropathy | -0.599 |
Instability index | 64.59 |
Isoelectric point | 4.73 |
Molecular weight | 16331.16 |
Publications |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery.
ECO:0000256 RuleBase:RU364060 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP03742 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 79.52| 22| 41| 20| 43| 2 --------------------------------------------------------------------------- 20- 43 (40.84/18.04) YENDPS.SAPEPPPPVDGPYqlFGA 63- 85 (38.68/13.37) YPKSPDiGAEDPEQRASAPY..FGA --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) MATSSAYPPPPPYYRFYKDYENDPSSAPEPP 2) PYQLFGATYTIDVVLPSLEDQGVRQLYPKSPDIGAE | 1 37 | 31 72 |
© 2021 Shailesh Lab
Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab