<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03723

Description Uncharacterized protein
SequenceMDSDGEEYDAMWSARCSVSSSTGSLRDAGDQWDEQSLAVGEDKVFVAVDEDIEHGKSTFLWAVQNLATDGSKIVVAHVHSPAQALSKSKHLASSALTATITWCNSVYICRCGAKVHCTRMKPEEISDYLMLEREEAEKKLDEYALVAKNTGKDMEIDCKKVIIDMDDVAKGLEELITLHGITRLVMGAAADQHYSEEMKEPNSKIALKLMETASSSCKIWFTCNGNLICTREPNENLLAIYVPPAQSNMVPLSVCSISSQMSSIELKNEAPSSEEYTLRSLAQSAMSDWDYIFGDWGRTGYGSLRTDDAISIPEATTLAAIVDDTKKQRSVMHSPRESDSVNFLSPACDPEQEEEESNLEEDMHDILNEACTRAELLKEEVDGESSKRRKAEMDLLIALQRVQESEKTYLHEVNQRKETEKTLARQRLEIDEMKRQHNALHDELQDTKKQKLLLEQRISEIKSAAKDYVEEITEYFIQESCEEAKKCQKIKMDLLAVLQRVKYVENLNRNEKMQRKDMEEKIARQRMEIEETKRQRDELYHELKDVKEQKLCLERVDSSEETKRRRKAESEMISALKRVHDLEHQYLNELKRREAVEETLARQKEEIQETKRKLNKIHSRYMTEIKSITKAHEEKLAESKRFIQKIQAKYDKTLHERDTAITESEKLRQMNRDGASMIATTQITDFSFFELRQATQDFDTALKIGTGRFMNVYKGFIRNTTIAVMLLHPQDLQGQLEFHQEVVVLSRLRHPNVMMLIGACPEAFGMVYEFLPNGSLEDQLSCKKNTPPLTWKVRTRIIGEICSALTFIHSQKPHPVVHGNLNPMNILLDANFVSKLHACQLLRKYNTRNNTSGTSSYIDPEFLSTGELAPRCDVYSFGIIILRLLTGKSPENITTIVEDAMEKRQLHSIMDISAGSWPFMQANQLAHLGLRCANLSGRHRPDLTGEVWGVIKPLLKDASQNYGCKQPFEALSDDAHAPSYFICPILQEVMTDPHIAADGYTYEVNAIREWIDGGNARSPMTNLRLENRELTPNRVLRSAILEWRQHRR
Length1048
PositionTail
OrganismOryza punctata (Red rice)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.06
Grand average of hydropathy-0.576
Instability index51.22
Isoelectric point5.68
Molecular weight119770.77
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03723
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     168.50|      26|      27|     387|     412|       1
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  387-  408 (30.51/17.30)	....................KRRKAEMDLLIALQR..VQESEKT
  409-  436 (26.26/13.80)	YLHE..............vnQRKETEKTL..ARQRleIDEMKRQ
  468-  507 (21.29/ 9.70)	YV..eeiteyfiqesceeakKCQKIKMDLLAVLQR..VKYVENL
  508-  532 (29.54/16.51)	NRNE...............kMQRK.DMEEKIARQR..M.EIEET
  539-  562 (18.56/ 7.45)	LYHE.........lkdvkeqK.........LCLER..VDSSEET
  563-  585 (25.10/12.84)	...K................RRRKAESEMISALKR..VHDLEHQ
  586-  609 (17.24/ 6.36)	YLNE..............lkRREAVEETLARQKEE..IQE....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     182.43|      61|     119|      43|     109|       2
---------------------------------------------------------------------------
   43-  109 (90.60/86.93)	KVFVAVDeDIEHGKSTF..LWAVQNLATDGSkivvAHVH......SPAQALS.KSKHLASSALTATITwCNSVYIC
  160-  229 (91.83/66.73)	KVIIDMD.DVAKGLEELitLHGITRLVMGAA....ADQHyseemkEPNSKIAlKLMETASSSCKIWFT.CNGNLIC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     370.58|     114|     127|     761|     887|       3
---------------------------------------------------------------------------
  761-  883 (181.87/175.12)	PEAFGMVYE.FLPNGSLEDQLSCKKNTPPLTWKVRTRIIGEICSALTFIHSQKPHPVVHGNLNPMniLLDAnfvSKLHACQllRKYNTRNNTSGTSSY.IDP...EFLSTGELAprCDVYSFGIIILR
  890- 1008 (188.71/140.66)	PENITTIVEdAMEKRQLHSIMDISAGSWPFMQANQLAHLGLRCANLSGRHRPDLTGEVWGVIKPL..LKDA...SQNYGCK..QPFEALSDDAHAPSYfICPilqEVMTDPHIA..ADGYTYEVNAIR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.62|      15|      21|     334|     348|       4
---------------------------------------------------------------------------
  334-  348 (27.94/17.81)	SPRESDSVNFLSPAC
  357-  371 (27.68/17.58)	SNLEEDMHDILNEAC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.15|      16|      23|     667|     682|       6
---------------------------------------------------------------------------
  667-  682 (28.60/20.49)	LRQMNRD..GASMIATTQ
  691-  708 (22.55/14.52)	LRQATQDfdTALKIGTGR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.75|      20|     163|     447|     479|       7
---------------------------------------------------------------------------
  458-  479 (29.41/33.73)	ISEIKSAAKDyvEEITE..YFIQE
  622-  645 (24.34/ 6.22)	MTEIKSITKAheEKLAEskRFIQK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.74|      22|     236|      16|      37|       8
---------------------------------------------------------------------------
   16-   37 (40.01/24.02)	CSVSSSTGS..LRDAGDQWDEQSL
  255-  278 (33.74/19.16)	CSISSQMSSieLKNEAPSSEEYTL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03723 with Med32 domain of Kingdom Viridiplantae
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