<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03708
Description |
Uncharacterized protein |
Sequence | MEEAVRVDLDKLPIKRLHAIDEAGNEHYPPDTSSEEQRLSAIRRIDFSWVIDKDAKKPKKDTAQQQQQQAWPWQGMMESLQQAQQELSVVIDLISTVEANDAVAVAGMLKPKSLPTETLVDTAVSAATKLQRVRHLSRYFKQSAKTMEQQFQKESRLQQNWKVKRQRFGGSGPGSEGFMFDLIDTSQLDTAAMPRLSSLPLIPIDQDSSGTLSVQVPQKSCRFLSLNFRGDSANGVENYGHKLKDGISSITSSETDNDDVNKSIKHAHSILRNIHKSIFEEQVFDMVIRETFVQSQGINVTGMREDFLQLAIGQECSLCLSLAHSGDGSDSEMVDHEDHANSEDASNLVLVTMNGKLDPLRKDVTGFPNPRSLEIYLLQLFHENILRKVREKSLNIGRYQSPAQVAGDDYGLLGHFCLTVAHRIFSNKVLVELESVVSRVPYLHLRSLPTWHSRTSSWSLCLKVPQPILAADRIAKPSDNHELKYKSRSQFNTKVIVKDSQISLMGEGSPSIAGSLTGKPSDGYLVNSYNCDLEDLPTMLLQQVASQVIHWLHEEALVLGMNVTRDFLCLYFDLEQGETLGLVANVDPDDTCGCISWYLTIDHPTEDGKMSADSQEFEKRRFLGYVSLEVLYSTLMDLINLCNAGAHH |
Length | 648 |
Position | Head |
Organism | Oryza nivara (Indian wild rice) (Oryza sativa f. spontanea) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.374 |
Instability index | 46.29 |
Isoelectric point | 5.53 |
Molecular weight | 72574.25 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:EnsemblPlants
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GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
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GO - Biological Process | production of miRNAs involved in gene silencing by miRNA GO:0035196 IEA:EnsemblPlants
regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP03708
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 83.68| 24| 247| 194| 218| 1
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194- 218 (39.48/32.03) P..RLSSLPLIPiDQDSSGTLSVQVPQ
441- 466 (44.20/30.88) PylHLRSLPTWH.SRTSSWSLCLKVPQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 252.58| 87| 95| 230| 324| 2
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230- 324 (122.76/119.70) GDSANG..VENYGHKLKDGISSITSSeTDN...DDVNKSIKhAHSILRNIHksIFEEQVF.DMVIREtfVQSQGINVtGMREDFLQLAiGQECSL....CLSLAH
326- 422 (129.82/92.69) GDGSDSemVDHEDHANSEDASNLVLV.TMNgklDPLRKDVT.GFPNPRSLE..IYLLQLFhENILRK..VREKSLNI.GRYQSPAQVA.GDDYGLlghfCLTVAH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.84| 14| 15| 137| 151| 4
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137- 151 (20.89/19.68) SRyFKQSAKTMEQQF
155- 168 (25.95/17.83) SR.LQQNWKVKRQRF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 47.15| 13| 41| 467| 479| 5
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467- 479 (23.20/14.68) PILAADRIAKPSD
510- 522 (23.94/15.37) PSIAGSLTGKPSD
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