<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03685

Description Uncharacterized protein
SequenceMGVKDVRKVKAEKEVFFFTKIDEGLLHLIEIYGVTKLVMGAASDRHYKSFTLSVLIDCDKNMTIFVAQKNESTTITNSNKCDAKSTFILQYMVYLQREANMCQAKRLGCMYINEMELRKETEAKLSQEKEESESLKHATMVLQNDLDWLKYQLNEKANRLQDLNQQKHLLEHRISESDSVATYLEESMKVTESRVQSLKLEYSKMKRERDDAVKEARSMRIEKELTNSCAYGAISSEFSLMELEQATQNFSNALNIGQGGFGSVYKGSLRNTTVAIKMLSTDSLHGQSQFHQEVAILSRVRHPNLVTLIGACTEASALVYELLPNGSLEDRLNCVDNTPPLTWQVRIQIITEICSALIFLHKHRPHPVVHGDLKPGNILLDANLQSKLSDFGISRLLLESSVTGSDAHYTSRPMGTPAYMDPEFFATGELTPQSDTYSFGVTIMRLLTGRAPLRLIRTVREALNDDDLQSVLDHSAGDWPLVHVEQLAHIALQCTELSKQRRPDLEHDVWEVIEPMKKEAHSPLSQSFRSICSAIETATPSYFLCPISQVLQVRKVTMRDPQMAADGFTYEADAIRDWLDKGHDRSPAAEANLRKQLEQTLAGEPSSPLHHYNLGVFLWDRAEAAAREEGEEEEEVRRLRAAAAERFLAAAKLDPNDGVPFRFLGHHYALAGDAQRAAKCYQRAATLNPDDAEAGEAVCDLLDLEGKESLEIALCKEAAGKSPRAFWAFRRLGYLQALGLAYHRLGMFTAAVKSYGRAVELDGSKVFALIESGNIQLMLGYFRKGVEQFRSALEMAPQNHSAYFGLASALLAWARQCVMTGAFGWAASLLKLALARCFPWDDGNIKGGMDDGTFRTTVLEWRNTCLLAANGAKFSYQRALHLTPWEANIHNDTAICLDLIYTIEENNSLDPITWELPEKMSLGGLILEPVNKDFWVTLGSVSSNQALKQHSFIRALHLDMSLSEAWAYLGKLPEFQIGLGTIAARSGELLSPQVLMAVRQAVQRAPHYPESHNINGLVSEVRSDFQSAIASYRQAKFALDMMRNSKTDCRCHIADISVNLARSLCKIYALSLWKLGRHDEALSVSRNLAENLSSMKQESATAALGFICTLTYNISGKDSAAAVIHKLPGQLNYSTQLKFIISALDALQPNKRFQLPQLSMPPRLTSYEVMSEVHSNIALGNAIGGESDKFLRVYGGLSYLKKVLHMYPDCSLVRNQLGSLLLSSEDWMASHKAVRVTSLSRGYTSNRGLRSPHQIQACAAVSCYATCTSYPKFSFPTCEDQYLSGYNAICRLQRWVHLEPWNQDARRLLVLTLFQKAREEKYPKHICTILKRLILQVLSSGSNSQDNKVVQYGNYLLLLVASEVSLQSGDHGNCIAQATEALGVTSSSVDSFFAHLQLCRAYVMQGNLLNSRSEYMKCLQNRTDTEIGWVILKQLASICSLEGTPDEIEIHLRGCVERKGSNASKWMSLFYLACAQCSVWNEDFASAEKAIAQACAEGDPDSCVLFLNGAICMDIAWRFAAPQFIARAASSLRKAQQKSLASLPIVSLLLAQAEGSLGSKAKWEKNLRLEWFSWPPELRPAELYFQMHLLATQSSAATSQQNQLVETMQTPEKWLLRAIHLNPSCSRYWTALMQLVYV
Length1638
PositionTail
OrganismOryza nivara (Indian wild rice) (Oryza sativa f. spontanea)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.08
Grand average of hydropathy-0.201
Instability index50.06
Isoelectric point6.61
Molecular weight183102.31
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03685
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     210.32|      62|     412|    1150|    1211|       1
---------------------------------------------------------------------------
 1150- 1211 (105.82/59.93)	NKRFQLPQLSMPPRLTSYEVMSEVHSNIALGNAIGGESDKFLR.VYGGLSYLKKVLHMYPDCS
 1564- 1626 (104.50/59.10)	EKNLRLEWFSWPPELRPAELYFQMHLLATQSSAATSQQNQLVEtMQTPEKWLLRAIHLNPSCS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     269.80|      67|      69|     732|     798|       2
---------------------------------------------------------------------------
  664-  717 (74.55/46.87)	..............LGHHYALAGDAQR......AAKCYQRA...ATLNPDDAEAGEAVCDLLDLE..GKESLEIALCKE
  718-  791 (102.53/67.67)	AAGKSPRafwafrrLGYLQALGLAYHRLGMFTAAVKSYGRA...VELDGSKVFALIESGNIQLML..GYFRKGVEQFRS
  792-  863 (92.71/60.37)	ALEMAPQ..nhsayFGLASAL.LAWARQCVMTGA...FGWAaslLKLALARCFPW.DDGNIKGGMddGTFRTTVLEWRN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.23|      27|     207|     893|     920|       3
---------------------------------------------------------------------------
  893-  920 (45.70/33.75)	TA....IClDLIYTIEENNSLDPITWELPEKM
 1101- 1131 (41.53/25.70)	TAalgfIC.TLTYNISGKDSAAAVIHKLPGQL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.58|      10|      20|      58|      68|       4
---------------------------------------------------------------------------
   58-   68 (15.62/15.93)	CDKNMTiFVAQ
   81-   90 (18.96/12.97)	CDAKST.FILQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.82|      25|     207|     162|     193|       5
---------------------------------------------------------------------------
  162-  188 (38.70/40.09)	DLNQQKHLLEHRISESDsvATYLEESM
  390-  414 (44.11/25.44)	DFGISRLLLESSVTGSD..AHYTSRPM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.48|      23|     413|     864|     886|       8
---------------------------------------------------------------------------
  864-  886 (44.06/27.43)	TC...LLAANGAKFSYQRALHLTPWE
 1277- 1302 (43.42/26.93)	TCedqYLSGYNAICRLQRWVHLEPWN
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03685 with Med32 domain of Kingdom Viridiplantae
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