<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03649

Description Uncharacterized protein
SequenceMEAEDDDEREAEARREKEAGNAAYRKLYLETAVRHYTRGALLDPRDISFLTNRAAAYLLMSKYKECVRDCDEAVEKGRELRADNKLVARALARKASALLKLAACAADYEPAIRALQQSLAEHYSEETLAKLGEAEEARKEIEERERLDQEAADHHRDRGNDFFKQKRYQEAVMHYTEAMKKNPKDPRVFSNRAQCHIYLGALSEGLEDADKCIELDPTFLKGYLRKAKVQLLMGNYEIALATYVEGLKCDPNNLEVLDGLRRCATCIKRANGGDARAEDLREILGDMHLNDDLCNKLQKSMDEAAVLKKEASDERLKRIESERLARTLEDLYLSQVQQRKETEESLSRVQQEFEQLKIHQDEVTVELQKVNEQNENLLGQLSDSREHFEWLLSEHDQLLRERDNAVREVEELRQKRGQMLSVLVTAMHCEFSSSEVESATENFSNSLKIGEGGFGCVYKGILRNMTVAIKVLRPDSLQGQSQFEQEVSILSRVRHPHLVTLLGACSESSTLVYEFLPNGSLEDFLMCLDKRQTLTWQARIRIIAEICSALIFLHKNKPHPVVHGDLKPANILLGVNLVSKLSDFGISRLLIQSSTNNTTLYRTMHPVGTPLYMDPEFLSTGELTPQSDVYSFGIVVLRLLTGKPPVGIKKIVEDAMEKGDLNSVIDTSVGEWPHLLIEQLAYLALRCTELSRRCRPDLSGEVWAIVEAIRDATLSSPSSSRSAQDQNSPPSYFICPISQDIMDDPHIAADGFTYEAEAIRSWLCNGHDTSPMTNLRLEHEELVPNRALRSAIQEWLQQHSMSL
Length803
PositionTail
OrganismOryza nivara (Indian wild rice) (Oryza sativa f. spontanea)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.06
Grand average of hydropathy-0.478
Instability index49.04
Isoelectric point5.36
Molecular weight91047.14
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03649
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     442.34|     126|     131|      93|     223|       1
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    2-   78 (90.84/52.03)	............................................................EAEDDDEREAEARREKeaGNAAYR..KLYLETAVRHYTRGALLDPRDISFLTNR.AAA..YLLMSKYKECVRDCDEAVE........KGR
   93-  223 (204.07/143.01)	RKASALLKLaacaADYEPAIRALQQSL.AEHYSEETLAKL.........GEAEEARKEiEERERLDQEAADHHRDR..GNDFFK..QKRYQEAVMHYTEAMKKNPKDPRVFSNR.AQC..HIYLGALSEGLEDADKCIELDPTF..LKGY
  225-  357 (147.43/91.65)	RKAKVQLLM....GNYEIALATYVEGLkCDPNNLEVLDGLrrcatcikrANGGDARAE.DLREIL....GDMHLN....DDLCNklQKSMDEAAVLKKEA..SDERLKRIESERlARTleDLYLSQVQQRKETEESLSRVQQEFeqLK..
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.13|      12|      30|     758|     770|       2
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  758-  770 (19.23/15.38)	AIRSWLcNGHDTS
  791-  802 (23.90/13.04)	AIQEWL.QQHSMS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03649 with Med32 domain of Kingdom Viridiplantae
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