<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03614

Description Uncharacterized protein
SequenceMEAAAGAGGAIGGSGREAAAEEEDGGEQWLEEEAEAEAVYCAVGKEAVKEWKANLMWVLAAFPWRRRRSRIVLIHVHRPPSRVNMMGAWVPVSQLAEEEVNAYRQLEEERISKVLDDLLDICKTWVANKVAEKNSQVNASKIIFSCDDIARGLLQLVDDHGITDLVMGAASDKAYSRKMRAPRSKKARKVQLKASPSCKIWFVCKGNLICTREVNEGLNRTGSSTTSTSPRSSTSDYSRSRSSPRVHSLSSEQFGMQDPAEPTTSSVDQTPIREDNAMDRGTEGFNHEAVAVASSSTVPVSENVEAVQRSAAAVVQSLQEIEEDSPTPSGHGSEDAGDVSDAYDKFKDAVIEAENLRHEAYEETRRRQKVERDLADATRIANEAESSQQREARHRKEVEERLARERAAMEQDRRELDDILAQTREVDARAAELELQITSSERMMRDLEAKLSESYDLLHQLRRERRRDDVPAEAMAGSEAGDQRLTFLRLGLPELEEATNHFDESVRIGGGEGSRGSVYRGDLRSMAVAVKMIGRDVAVDEVGFCREVEAVGRARHPNLVTLVGACPEARAVVHEFVPGGSLEDRLAGAAPALPWHELCGVAHRACSALAFLHSTQPRATVHGDVRPANILLGEECCSSKLAGLGMRRLVRSSGGVALSRPAVGYVDPRHLATGEMTPERDVYALGVVLLRLVTGKPPLMAKQEAREAAGGSKAWHEVFDASSGGWPLEVAREVALVGLKCCDVEEEPAGARRPGELLEEACGVLEAAMSAAPGRSWSSVSSSSDGGEGGAPSYFVCPILKEVMRDPQIAGDGFSYEAEAIREWLRSGRDTSPMTNLKLPRRELVPNHPLRDAIHHWRLRRAMRTNFTTGLDSYYY
Length876
PositionTail
OrganismOryza nivara (Indian wild rice) (Oryza sativa f. spontanea)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.05
Grand average of hydropathy-0.482
Instability index57.74
Isoelectric point5.49
Molecular weight96044.63
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03614
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     313.53|      90|     119|     485|     597|       1
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  485-  582 (143.83/81.20)	LTFLRLGLPeleEATNHFD.ESVRIGGGEGSRGSVYRG.DLRSMAVAVKMIGRDVAVDEVGFCREVEAV......GRARHPNLVTlvGACPEARAVvheFVPGGSL
  609-  689 (126.89/73.98)	LAFLHSTQP...RATVHGDvRPANILLGEECCSSKLAGlGMRRL...VRSSG.GVALSR.......PAV......GYVDPRHLAT..GEMTPERDV...YALGVVL
  786-  833 (42.82/11.36)	..........................GGEGGAPSYF.......VCPILKEVMRDPQIAGDGFSYEAEAIrewlrsGRDTSP.........................
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     303.92|      80|     181|     212|     295|       2
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  171-  209 (33.63/11.90)	.....................SDKAYSRKMRAPR.....SKKARKVQLKASP...SCKIWFVCKGNLI................
  212-  294 (118.40/72.56)	REvNEGLNRTGSSTTSTSPRSSTSDYSRSRSSPRV.HSLSSEQFGMQDPAEPTTSSVDQTPIREDNAMDRGTEgFnHEAVAVAS
  295-  354 (74.73/38.51)	..............SSTVPVSENVEAVQRSAAAVV.QSL..QEIEEDSPTPSGHGSEDAGDVSD..AYDK....F.KDAVIEAE
  365-  432 (77.16/38.33)	RR.RQKVERDLADATRIANEAESSQQREARHRKEVeERLARERAAMEQDRRELDDILAQT..REVDA..RAAE...........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     115.89|      26|     160|     583|     608|       3
---------------------------------------------------------------------------
  583-  608 (50.61/24.71)	EDR.LAGA.APALPWHELCGVAH........RACSA
  704-  735 (26.37/ 9.65)	EAReAAGG.SKA..WHEVFDASSggwplevaREV.A
  745-  771 (38.91/17.45)	EEE.PAGArRPGELLEEACGVLE........AAMSA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     108.62|      33|      73|      20|      54|       4
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   20-   54 (52.66/32.01)	AEEEDGGEQWLEEEAEAEAVYCAVgkEAVKEWKAN
   96-  128 (55.96/28.70)	AEEEVNAYRQLEEERISKVLDDLL..DICKTWVAN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.10|      10|      21|     441|     450|       5
---------------------------------------------------------------------------
  441-  450 (17.47/ 8.17)	ERMMRDLEAK
  464-  473 (17.63/ 8.31)	ERRRDDVPAE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03614 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) NEGLNRTGSSTTSTSPRSSTSDYSRSRSSPRVHSLSSEQFGMQDPAEPTTSSVDQTPIREDNAMDRGTEGFNHEAVAVASSSTVPVSENVEAVQRSAAAVVQSLQEIEEDSPTPSGHGSEDAGDVSDAYDKFKDAVIEAENLRHEAYEETRRRQKVERDLADATRIANEAESSQQREARHRKEVEERLARERAAMEQDRRELDDILAQT
215
423










Molecular Recognition Features






MoRF SequenceStartStop




NANANA