<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03592

Description Uncharacterized protein
SequenceMKRARSSEVFLGGRGRARRRVAPLLAAVAFVYLLFVSVKLSGLAGIADPAAVTRPASGGAGELVMPRRLEDPAPRARGDGDGVAVAGYGRITGEILRRRWEAGGRGRRRWGRGGNFSELERMADEAWELGGKAWEEACAFTGDVDSILSRDGGDETKCPASINIGGGDGETVAFLPCGLAVGSAVTVVGTARAARAEYVEALERRGEGNGTVMVAQFAVELRGLRAVEGEEPPRILHLNPRLRGDWSHRPVLEMNTCFRMQWGKAHRCDGNPSKDDDQVDGLIKCEKWDRRDSVDSKETKTGSWLNRFIGRAKKPEMRWPYPFSEGKMFVLTIQAGIEGYHVSVGGRHVASFPHRMGFSLEDATGLAVTGGVDVHSIYATSLPKVHPSFSLQQVLEMSDRWKARPVPEEPIQVFIGIISATNHFAERMAIRKSWMQFPAIQLGNVVARFFVALSHRKEINAALKTEAEYFGDVVILPFIDRYELVVLKTVAICEFGVQNVTAEYIMKCDDDTFVRLDVVLKQISVYNRIMPLYMGNLNLLHRPLRHGKWAVTYEEWPEFVYPPYANGPGYVISIDIARDIVSRHANHSLRLFKMEDVSMGMWVEDFNTTAPVQYIHSWRLRFNLMDSDDKKFGKGPRELTGAVDLISHHKLLAHHDFFCKKPLPLAISDTHYLHNVVGDTEIRKGEGMELDQLVQNAYLRDKPAYIQPFDMETLGQAFQLRETAPVDLPSGEKGIPTISGKPKSESKDKEKKHKKHKDKDRDKDKEHKKHKHRHKDRSKDKDKDKDKDKKKDKSGHHDSGGDHSKKHHEKKRKHEGMEDSADVHKHKKSKVAHTAIMILAGIANFLIE
Length848
PositionHead
OrganismOryza meridionalis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.08
Grand average of hydropathy-0.512
Instability index38.71
Isoelectric point9.12
Molecular weight95164.59
Publications









Function






Annotated function


GO - Cellular Component
Golgi membrane	GO:0000139	IEA:UniProtKB-SubCell
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
carbohydrate binding	GO:0030246	IEA:InterPro
transferase activity, transferring hexosyl groups	GO:0016758	IEA:InterPro

GO - Biological Process
protein glycosylation	GO:0006486	IEA:UniProtKB-UniPathway









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03592
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     101.73|      20|      21|     757|     776|       1
---------------------------------------------------------------------------
  741-  755 (20.17/ 8.27)	.....KPKSESKD.KE.KKHK.K
  756-  773 (35.80/20.67)	H....KDKDRDKD.KEHKKHKHR
  791-  809 (26.51/13.30)	.KD..KSGHHDSG.GDHSKKHHE
  810-  832 (19.25/ 7.53)	KKRkhEGMEDSADvHKHKKSKVA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      98.28|      23|      23|      94|     116|       2
---------------------------------------------------------------------------
   64-   82 (22.66/ 6.63)	.VMP...RRLEDPAPRARGDGDG...
   94-  116 (45.34/19.69)	EILR...RRWEAGGRGRRRWGRGGNF
  118-  140 (30.28/11.02)	ELERmadEAWELGGKA...WEEACAF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.88|      15|      15|     235|     249|       3
---------------------------------------------------------------------------
  235-  249 (30.90/14.81)	ILHLNPRLRGDW..SHR
  251-  267 (25.98/11.55)	VLEMNTCFRMQWgkAHR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.43|      18|      23|     449|     471|       4
---------------------------------------------------------------------------
  449-  471 (18.98/31.43)	FFValsHRKEInAALKTEA..EyFG
  477-  496 (28.44/18.82)	PFI...DRYEL.VVLKTVAicE.FG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.14|      12|      23|     339|     351|       5
---------------------------------------------------------------------------
  339-  351 (19.22/13.87)	GYHVSvGGRHVAS
  365-  376 (21.92/11.24)	GLAVT.GGVDVHS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.33|      15|      15|     151|     165|       7
---------------------------------------------------------------------------
  151-  165 (27.56/17.49)	DGGDETKCPASINIG
  168-  182 (26.77/16.78)	DGETVAFLPCGLAVG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.12|      12|      20|     196|     209|       8
---------------------------------------------------------------------------
  196-  209 (17.75/16.21)	AEYveALERRG....EGN
  215-  230 (16.37/ 7.71)	AQF..AVELRGlravEGE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     163.05|      40|      50|     605|     644|       9
---------------------------------------------------------------------------
  605-  644 (67.87/40.82)	DFNTTAPVQY.IHSWRLR.....FNLMDSDDKKFGKGPRELTGAVD
  656-  695 (55.73/32.25)	DFFCKKPLPLaISDTHYL.....HNVVGDTEIRKGEG.MELDQLVQ
  696-  735 (39.46/20.76)	NAYLRDKPAY.IQPFDMEtlgqaFQLRETAPVDLPSGEKGI.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     111.07|      31|     239|     300|     334|      11
---------------------------------------------------------------------------
  300-  334 (49.34/43.43)	KTGSWLnrfIGRAKKPEMRWPyPFSEGKMFVLTIQ
  545-  575 (61.73/38.91)	RHGKWA...VTYEEWPEFVYP.PYANGPGYVISID
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03592 with Med19 domain of Kingdom Viridiplantae
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