<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03576
Description |
Uncharacterized protein |
Sequence | MEVDGGAGGGGGGGGVGDVEGGGGGGAGGGGGGGGQQASPATVFRIRLKQPPSSLRHKMRVPELCRNFSAVAWCGKLNAIACASETCARIPSSNSSPPFWIPIHILNPERPTECSVFNVKADSPRDFVQFIEWSPRSCPRALLVANFHGRITIWTQPTKGPTNLVRDASSWQCEHEWRQDLSVVTKWLSGISPYRWLPANSSTSSNLKTFEEKFLTQQPQSSVFSSGSVQLHWSQWPSQNSAQPRWFSTSKGLLGAGPSGIMAADAVITETGALHVAGVPLVNPSTVVVWEVMPGLGNGIQATAKINATSSLPPSLNPPLWAGFAPLASYLFSLQDYLVSEGAQTKKQAQVDNETAEVASIHCCPVSNFSAYVSPEAAAQSATTTTWGSGVTSVAFDPTRGGSVITVVIVEGQYMSPYDPDEGPSITGWRVQCWESSVQPVVLHPIFGSPANFGGQPPTQTVWSTRVNKSIPPSEDLKNPQSYVPMPTTSDERSSSECSVDRANRLSFDPYDLPNDVRQLAQIVYSAHGGEVAVAFLRGGVHIFSGPNFEQVDSYHVNVGSAIAPPAFSSSGCCLASVWHDTLKDRTILKIIRVLPPAILNAQTKVSSAVWERAIADRFWWSLLAGVDWWDAVGCTQSAAEDGIVSLNSVIALLDADFHCLPTIQQRQQHCPNLDRIKCRLLEGTNAQDVRALVLDMQARLLLDMLGKGIESALINPSTLLPEPWQASSDMLSSIGPDKMTVDPALLLSIQGYVDAVLDLASHFITRLRRYASFCRTLASHAVGASSGSGNSRNMVTSPTNSSPSPSTNQGNQGGVASTTGSSQMQEWVQGAIAKISNNTDGAANAAPNPISGRSSFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCLLFRRRQSPRIPANAQKSSDSSMQKQHLMNSKTEDNTLAVRSGLGAAKLEDGTTSRGQMVGAKGAEENPVGNKSARIGSGNAGQGYTSDEVKVLFLILVDLCKRTATLQHPLPSSQVGSSNIIIRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGLLLRELELQPPAEEWHRRNMFGGPWSEPDDLGPLDNTRQLKINGSTNRHLSDMEEDGDSSFGIQNLWPRKRRLSERDAAFGLKTSVGLGSFLGVMGSRRDVITAVWKTGLEGEWYKCIRCLRQTCAFAQPGALAPNTSNELEAWWISRWTHACPMCGGTWVKVV |
Length | 1217 |
Position | Tail |
Organism | Oryza meridionalis |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.213 |
Instability index | 48.90 |
Isoelectric point | 6.80 |
Molecular weight | 130802.18 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:EnsemblPlants
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GO - Biological Function | |
GO - Biological Process | circadian regulation of gene expression GO:0032922 IEA:EnsemblPlants
positive regulation of plant-type cell wall cellulose biosynthetic process GO:2001011 IEA:EnsemblPlants
positive regulation of systemic acquired resistance GO:1901672 IEA:EnsemblPlants
regulation of cell wall pectin metabolic process GO:1902066 IEA:EnsemblPlants
regulation of ethylene-activated signaling pathway GO:0010104 IEA:EnsemblPlants
regulation of jasmonic acid mediated signaling pathway GO:2000022 IEA:EnsemblPlants
regulation of long-day photoperiodism, flowering GO:0048586 IEA:EnsemblPlants
regulation of transcription, DNA-templated GO:0006355 IEA:EnsemblPlants
response to osmotic stress GO:0006970 IEA:EnsemblPlants
root development GO:0048364 IEA:EnsemblPlants
trichome branching GO:0010091 IEA:EnsemblPlants
trichome papilla formation GO:1905499 IEA:EnsemblPlants
|
Interaction
Repeat regions
Repeats |
>MDP03576
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.61| 11| 19| 5| 15| 1
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5- 15 (26.62/11.29) GGAGGGGGGGG
21- 31 (25.99/10.87) GGGGGGAGGGG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 57.72| 18| 24| 704| 721| 2
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704- 721 (32.73/20.73) DMLGK.GIESALINPSTLL
730- 748 (24.99/13.86) DMLSSiGPDKMTVDPALLL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 77.76| 22| 30| 565| 586| 3
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565- 586 (43.23/27.38) PPAFSSSGCCLAS.VWHDTLKDR
596- 618 (34.53/20.28) PPAILNAQTKVSSaVWERAIADR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 53.84| 15| 15| 780| 794| 4
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780- 794 (25.91/12.57) SHAVGASSGSGNSRN
798- 812 (27.92/14.19) SPTNSSPSPSTNQGN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 33.70| 10| 14| 920| 929| 5
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920- 929 (17.48/12.96) LMNSKTEDNT
936- 945 (16.22/11.42) LGAAKLEDGT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 70.31| 19| 20| 154| 172| 9
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154- 172 (35.59/23.14) WTQPTKGPTNLVRDASSWQ
177- 195 (34.72/22.37) WRQDLSVVTKWLSGISPYR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.13| 12| 26| 60| 73| 10
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60- 73 (19.84/13.05) RVPelCRNFSAVAW
89- 100 (25.29/11.27) RIP..SSNSSPPFW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 65.01| 19| 418| 34| 53| 11
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34- 53 (30.93/20.12) GGQQASpATVFRIRLKQ..PPS
454- 474 (34.09/17.31) GGQPPT.QTVWSTRVNKsiPPS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 69.72| 21| 22| 836| 857| 13
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836- 857 (33.27/20.60) ISNNTdGAANAAPN.PISGRSSF
860- 881 (36.45/18.33) ISINT.GTFPGTPAvRLIGDCHF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 51.01| 10| 30| 408| 417| 16
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408- 417 (17.33/ 6.84) VIVEGQYMSP
432- 440 (16.63/ 6.29) QCWESS.VQP
441- 450 (17.05/ 6.62) VVLHPIFGSP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 38.08| 10| 23| 476| 485| 18
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476- 485 (19.64/13.05) DLKNPQSYVP
501- 510 (18.44/11.74) DRANRLSFDP
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