<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03571
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAEGELGQQTVELGAVVRRAAAESYLSLRELVEKSQDEGEGKGGAYGARQRSDSEKKIDLLKFIARTRQRMLRLHVLAKWCQQVPLVNYCQQLGSTLSSHETCFTQTADSLYFMHEGLQQARAPMFDIPSALEVMLTGNYQRLPLCIEDIGSQNKLSPDEEKRALQKLNASVRYKVLVTPRPKEVSNVSVADGIAVFRVDGEFKVLLTLGYRGHLDLWRILHLELLVGDKGGPIKLEERRRFALGDDIERRMAVSENPFMVLYAILHELCISLAMDTIIRQTNVLRQGRWKDAIRSELVSDSTTGQTGSAPLMQLGQDGEYDLSGSRIPGLKINYWLDEKAGGSAESDSSPFIKIEARQDMQIKCQHSLFILDPLTDKEANLSLDLCCIDVEQLILRAIASNRHTRLLDIQRQLSKNVQISQSPKDVILKRDVEIAKDPVKKTEQKDFADCCGNEVLQVRAYGQAYIGLGINIRSGRFLLQSPENILPPSALLDCEEALNKGSITATDVFASLRTRSILHLFAATGSFFGLKVYEKSQGTLKIPKDILHGSDLMVMGFPQCANAYYLLMQLDKDFRPVFHLLETQSDANDKTNTNACTKEALRFNKIDIGQIQISKRSINLITMGSDGPSRKRSISDLFLNLPSLQGLKPSSPRKRRRISESMESWSPLQAYSSDSQSRTSLTYGNILAERNNCVPATTYASVLLHVIRHCSLSIKHAQITAQMDSLAIPYVEEVGLRSPSSNLWLRLPFARDDSWKHICLRLGKAGSMSWDVRINDPHFRELWELSTGSTTTSWGVGVRVANTSEMDSHISFDAEGVILTYSNVEPDSVQKLVSDLRRLANARSFARGMRRLIGVILNDKLDDDQTSTDIKSQPVNKGNSDAADRLSEQMRKTFRIEAVGLMSLWFSYGTMPMVHFVVEWESAKGGCTMHVSPDQLWPHTKFLEDFVNGGEVASFLDCIRLTAGPLLALGGAIRPARMPVTVSSGYNSMPKQMNNIPTQGPLANGSSSTTMHHAPSPANVAATHVGSHNLHTAAMLSAAGRGGPGLVPSSLLPFDVSVVLRGPYWIRIIYRKKFSVDMRCFAGDQVWLQPATPPKGGPLVGGSLPCPQFRPFIMEHVAQGLNALEPSFMNATQAGAHLNSSAGTLQSAPNANRVNATQGIGMSRPASGVANHVAANLSRAGNAMLASSGLASGIGGASVRLTSGANLPVHVKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFAQLPELLKEILGSILKENEGALLNLDQEQPALRFYVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQAQNSAQEELAPPEINEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGFSQAHGDIATAQRARIEICLENHSGSVSDDITESTLAKSNVKYDRAHSSLEFALTFVLDHALIPHMNVAGGAAWLPYCVSVRLKYSFGESNHIAYLAMDGSHGGRACWLQYEDWERCKQKVARAVETVNGSVAVGESGQGRLRMVAEMIQKQLQLCLQQLRDGPLSAGSTAS |
Length | 1557 |
Position | Tail |
Organism | Oryza meridionalis |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.183 |
Instability index | 50.02 |
Isoelectric point | 8.48 |
Molecular weight | 171248.95 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP03571
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 189.06| 49| 105| 206| 254| 1
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206- 254 (82.42/55.71) LLTLGYRGHLDL..WRI..LHLELLVGDKGGPIKLEER..RRFALGDDIERR..MAV
257- 298 (46.65/27.98) ......NPFMVL..YAI..LH.ELCISLAMDTIIRQTNvlRQGRWKDAIRSE..L..
312- 363 (59.99/38.32) LMQLGQDGEYDLsgSRIpgLKINYWLDEKAGGSAESDS..SPFI...KIEARqdMQI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 68.26| 22| 239| 960| 987| 2
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961- 985 (31.07/26.48) RLTAGPLLalGGAI.....RPARMPvTVSS
1094- 1120 (37.19/18.21) PPKGGPLV..GGSLpcpqfRPFIME.HVAQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 83.09| 24| 105| 1015| 1040| 3
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1015- 1038 (43.54/18.08) APSPANVAATHVGSHNLHTAAMLS
1124- 1147 (39.55/15.59) ALEPSFMNATQAGAHLNSSAGTLQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 115.40| 37| 106| 602| 643| 4
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602- 643 (58.61/45.79) LRFNKIDIGQIQISKR....SINLI.TMGSDGPSrkrsiSDLFLNLP
708- 749 (56.80/33.81) IRHCSLSIKHAQITAQmdslAIPYVeEVGLRSPS.....SNLWLRLP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 134.25| 40| 404| 1047| 1090| 7
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1047- 1090 (66.92/53.04) LVP.......SSLLPFDVSVVLRGPYW..IRIIYrkkFSVDmRCFAGDQVWLQ
1447- 1495 (67.33/41.13) LIPhmnvaggAAWLPYCVSVRLKYSFGesNHIAY...LAMD.GSHGGRACWLQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 108.51| 32| 114| 765| 817| 12
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767- 814 (51.96/70.28) GSMS.W..DVRINDPHFRELWELSTGSTTTswgvgvrvantsemdsHISFD
901- 935 (56.55/27.91) GLMSlWfsYGTMPMVHFVVEWESAKGGCTM................HVSPD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 88.14| 26| 35| 1173| 1202| 13
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1173- 1202 (38.09/27.25) HVAANLsragNAMLASSGLASGIGGASVRL
1211- 1236 (50.05/26.65) HVKGEL....NTAFIGLGDDGGYGGGWVPL
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