<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03570
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAEGELGQQTVELGAVVRRAAAESYLSLRELVEKSQDEGEGKGGAYGARQRSDSEKKIDLLKFIARTRQRMLRLHVLAKWCQQVPLVNYCQQLGSTLSSHETCFTQTADSLYFMHEGLQQARAPMFDIPSALEVMLTGNYQRLPLCIEDIGSQNKLSPDEEKRALQKLNASVRYKVLVTPRPKEVSNVSVADGIAVFRVDGEFKVLLTLGYRGHLDLWRILHLELLVGDKGGPIKLEERRRFALGDDIERRMAVSENPFMVLYAILHELCISLAMDTIIRQTNVLRQGRWKDAIRSELVSDSTTGQTGSAPLMQLGQDGEYDLSGSRIPGLKINYWLDEKAGGSAESDSSPFIKIEARQDMQIKCQHSLFILDPLTDKEANLSLDLCCIDVEQLILRAIASNRHTRLLDIQRQLSKNVQISQSPKDVILKRDVEIAKDPVKKTEQKDFADCCGNEVLQVRAYGQAYIGLGINIRSGRFLLQSPENILPPSALLDCEEALNKGSITATDVFASLRTRSILHLFAATGSFFGLKVYEKSQGTLKIPKDILHGSDLMVMGFPQCANAYYLLMQLDKDFRPVFHLLETQSDANDKTNTNACTKEALRFNKIDIGQIQISKSESNTNMFDAKLHALQNIGNCDDVMENRLPIQSGIEPLPLLPACSPSFSSVVDEVFEYEHGALAVPNHSLPQTTLQSTSHPGSLSVGFQGVGTRANASIEGASSAYSGSKFAPGVGLNSYLPSNLRHVQSTNAFSSSTVTKSSSIKLPSSNSNHELSSLSSPTENVIADGSKSLQLVPASKINGSINLITMGSDGPSRKRSISDLFLNLPSLQGLKPSSPRKRRRISESMESWSPLQAYSSDSQSRTSLTYGNILAERNNCVPATTYASVLLHVIRHCSLSIKHAQITAQMDSLAIPYVEEVGLRSPSSNLWLRLPFARDDSWKHICLRLGKAGSMSWDVRINDPHFRELWELSTGSTTTSWGVGVRVANTSEMDSHISFDAEGVILTYSNVEPDSVQKLVSDLRRLANARSFARGMRRLIGVILNDKLDDDQTSTDIKSQPVNKGNSDAADRLSEQMRKTFRIEAVGLMSLWFSYGTMPMVHFVVEWESAKGGCTMHVSPDQLWPHTKFLEDFVNGGEVASFLDCIRLTAGPLLALGGAIRPARMPVTVSSGYNSMPKQMNNIPTQGPLANGSSSTTMHHAPSPANVAATHVGSHNLHTAAMLSAAGRGGPGLVPSSLLPFDVSVVLRGPYWIRIIYRKKFSVDMRCFAGDQVWLQPATPPKGGPLVGGSLPCPQFRPFIMEHVAQGLNALEPSFMNATQAGAHLNSSAGTLQSAPNANRVNATQGIGMSRPASGVANHVAANLSRAGNAMLASSGLASGIGGASVRLTSGANLPVHVKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFAQLPELLKEILGSILKENEGALLNLDQEQPALRFYVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQAQNSAQEELAPPEINEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGFSQAHGDIATAQRARIEICLENHSGSVSDDITESTLAKSNVKYDRAHSSLEFALTFVLDHALIPHMNVAGGAAWLPYCVSVRLKYSFGESNHIAYLAMDGSHGGRACWLQYEDWERCKQKVARAVETVNGSVAVGESGQGRLRMVAEMIQKQLQLCLQQLRDGPLSAGSTAS |
Length | 1740 |
Position | Tail |
Organism | Oryza meridionalis |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.187 |
Instability index | 50.45 |
Isoelectric point | 7.99 |
Molecular weight | 190217.64 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
plasmodesma GO:0009506 IEA:EnsemblPlants
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | cold acclimation GO:0009631 IEA:EnsemblPlants
positive regulation of cell population proliferation GO:0008284 IEA:EnsemblPlants
regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
systemic acquired resistance GO:0009627 IEA:EnsemblPlants
|
Interaction
Repeat regions
Repeats |
>MDP03570
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 354.67| 116| 133| 1154| 1286| 1
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1148- 1280 (181.40/131.67) GPLLALG...GAIRPARMPvTVSSGYNSM.PKQMNniPTQGPLANGSSSTTMHHAPSPANVAATH.VG.SHNL.....HTAAMLSaagRGGPGLVPSSLLPFDVsvvlrGPYWIRIIYRKKFSVDMRcfaGDqvwLQPATPPKG
1281- 1407 (173.26/91.01) GPLVGGSlpcPQFRPFIME.HVAQGLNALePSFMN..ATQAGAHLNSSAGTLQSAPNANRVNATQgIGmSRPAsgvanHVAANLS...RAGNAMLASSGLASGI.....GGASVRLTSGANLPVHVK...GE...LNTAFIGLG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 64.45| 18| 19| 786| 804| 2
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758- 782 (17.02/ 6.51) .SSSIKL.PSSNSNHE...LsslsspteNV
786- 804 (26.49/19.77) GSKSLQLvPASKINGS...I........NL
808- 825 (20.93/ 9.88) GSDG....PSRKRSISdlfL........NL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 134.60| 39| 132| 521| 559| 3
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521- 559 (68.81/53.60) LFAATGSFFGL..KVYEKSQGTLKIPKDILHGSDLMVMGFP
657- 697 (65.79/50.85) LPACSPSFSSVvdEVFEYEHGALAVPNHSLPQTTLQSTSHP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 239.68| 78| 107| 206| 286| 4
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206- 286 (128.94/85.85) LLTLGYRGHLDL..WRI..LHLELLVGDKGGPIKLEERRRFAlgdDIERR..MAVS.ENPFMVLYAIL.HELCISLAMDTIIRQTNVLR
312- 397 (110.74/66.38) LMQLGQDGEYDLsgSRIpgLKINYWLDEKAGGSAESDSSPFI...KIEARqdMQIKcQHSLFILDPLTdKEANLSLDLCCIDVEQLILR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 111.67| 32| 132| 944| 975| 5
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944- 975 (59.56/43.37) LRLGKAGSMS.W..DVRINDPHFRELWELSTGSTT
1078- 1112 (52.12/36.89) FRIEAVGLMSlWfsYGTMPMVHFVVEWESAKGGCT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.54| 14| 18| 1416| 1430| 10
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1416- 1430 (19.35/18.32) WVpLAALKKVLRGIL
1437- 1450 (25.19/17.12) WL.FAQLPELLKEIL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 70.98| 23| 128| 848| 879| 14
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848- 870 (43.29/38.06) SWS.PLQ.AYSSDSQSRTS.......LTYGNI
977- 1008 (27.69/ 7.53) SWGvGVRvANTSEMDSHISfdaegviLTYSNV
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