<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03569
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MHEGLQQARAPMFDIPSALEVMLTGNYQRLPLCIEDIGSQNKLSPDEEKRALQKLNASVRYKVLVTPRPKEVSNVSVADGIAVFRVDGEFKVLLTLGYRGHLDLWRILHLELLVGDKGGPIKLEERRRFALGDDIERRMAVSENPFMVLYAILHELCISLAMDTIIRQTNVLRQGRWKDAIRSELVSDSTTGQTGSAPLMQLGQDGEYDLSGSRIPGLKINYWLDEKAGGSAESDSSPFIKIEARQDMQIKCQHSLFILDPLTDKEANLSLDLCCIDVEQLILRAIASNRHTRLLDIQRQLSKNVQISQSPKDVILKRDVEIAKDPVKKTEQKDFADCCGNEVLQVRAYGQAYIGLGINIRSGRFLLQSPENILPPSALLDCEEALNKGSITATDVFASLRTRSILHLFAATGSFFGLKVYEKSQGTLKIPKDILHGSDLMVMGFPQCANAYYLLMQLDKDFRPVFHLLETQSDANDKTNTNACTKEALRFNKIDIGQIQISKSESNTNMFDAKLHALQNIGNCDDVMENRLPIQSGIEPLPLLPACSPSFSSVVDEVFEYEHGALAVPNHSLPQTTLQSTSHPGSLSVGFQGVGTRANASIEGASSAYSGSKFAPGVGLNSYLPSNLRHVQSTNAFSSSTVTKSSSIKLPSSNSNHELSSLSSPTENVIADGSKSLQLVPASKINGSINLITMGSDGPSRKRSISDLFLNLPSLQGLKPSSPRKRRRISESMESWSPLQAYSSDSQSRTSLTYGNILAERNNCVPATTYASVLLHVIRHCSLSIKHAQITAQMDSLAIPYVEEVGLRSPSSNLWLRLPFARDDSWKHICLRLGKAGSMSWDVRINDPHFRELWELSTGSTTTSWGVGVRVANTSEMDSHISFDAEGVILTYSNVEPDSVQKLVSDLRRLANARSFARGMRRLIGVILNDKLDDDQTSTDIKSQPVNKGNSDAADRLSEQMRKTFRIEAVGLMSLWFSYGTMPMVHFVVEWESAKGGCTMHVSPDQLWPHTKFLEDFVNGGEVASFLDCIRLTAGPLLALGGAIRPARMPVTVSSGYNSMPKQMNNIPTQGPLANGSSSTTMHHAPSPANVAATHVGSHNLHTAAMLSAAGRGGPGLVPSSLLPFDVSVVLRGPYWIRIIYRKKFSVDMRCFAGDQVWLQPATPPKGGPLVGGSLPCPQFRPFIMEHVAQGLNALEPSFMNATQAGAHLNSSAGTLQSAPNANRVNATQGIGMSRPASGVANHVAANLSRAGNAMLASSGLASGIGGASVRLTSGANLPVHVKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFAQLPELLKEILGSILKENEGALLNLDQEQPALRFYVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQAQNSAQEELAPPEINEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGFSQAHGDIATAQRARIEICLENHSGSVSDDITESTLAKSNVKYDRAHSSLEFALTFVLDHALIPHMNVAGGAAWLPYCVSVRLKYSFGESNHIAYLAMDGSHGGRACWLQYEDWERCKQKVARAVETVNGSVAVGESGQGRLRMVAEMIQKQLQLCLQQLRDGPLSAGSTAS |
Length | 1627 |
Position | Tail |
Organism | Oryza meridionalis |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.168 |
Instability index | 51.46 |
Isoelectric point | 7.90 |
Molecular weight | 177553.41 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP03569
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 354.67| 116| 133| 1041| 1173| 1
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1035- 1167 (181.40/169.01) GPLLALG...GAIRPARMPvTVSSGYNSM.PKQMNniPTQGPLANGSSSTTMHHAPSPANVAATH.VG.SHNL.....HTAAMLSaagRGGPGLVPSSLLPFDVsvvlrGPYWIRIIYRKKFSVDMRcfaGDqvwLQPATPPKG
1168- 1294 (173.26/116.86) GPLVGGSlpcPQFRPFIME.HVAQGLNALePSFMN..ATQAGAHLNSSAGTLQSAPNANRVNATQgIGmSRPAsgvanHVAANLS...RAGNAMLASSGLASGI.....GGASVRLTSGANLPVHVK...GE...LNTAFIGLG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 64.45| 18| 19| 673| 691| 2
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645- 669 (17.02/ 6.08) .SSSIKL.PSSNSNHE...LsslsspteNV
673- 691 (26.49/18.42) GSKSLQLvPASKINGS...I........NL
695- 712 (20.93/ 9.22) GSDG....PSRKRSISdlfL........NL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 134.60| 39| 132| 408| 446| 3
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408- 446 (68.81/45.01) LFAATGSFFGL..KVYEKSQGTLKIPKDILHGSDLMVMGFP
544- 584 (65.79/42.70) LPACSPSFSSVvdEVFEYEHGALAVPNHSLPQTTLQSTSHP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 239.68| 78| 107| 93| 173| 4
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93- 173 (128.94/96.08) LLTLGYRGHLDL..WRI..LHLELLVGDKGGPIKLEERRRFAlgdDIERR..MAVS.ENPFMVLYAIL.HELCISLAMDTIIRQTNVLR
199- 284 (110.74/74.31) LMQLGQDGEYDLsgSRIpgLKINYWLDEKAGGSAESDSSPFI...KIEARqdMQIKcQHSLFILDPLTdKEANLSLDLCCIDVEQLILR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 111.67| 32| 132| 831| 862| 5
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831- 862 (59.56/39.98) LRLGKAGSMS.W..DVRINDPHFRELWELSTGSTT
965- 999 (52.12/33.98) FRIEAVGLMSlWfsYGTMPMVHFVVEWESAKGGCT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.54| 14| 18| 1303| 1317| 7
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1303- 1317 (19.35/19.65) WVpLAALKKVLRGIL
1324- 1337 (25.19/18.37) WL.FAQLPELLKEIL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 70.98| 23| 131| 735| 766| 8
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735- 757 (43.29/39.71) SWS.PLQ.AYSSDSQSRTS.......LTYGNI
864- 895 (27.69/ 7.89) SWGvGVRvANTSEMDSHISfdaegviLTYSNV
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