<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03568
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAEGELGQQTVELGAVVRRAAAESYLSLRELVEKSQDEGEGKGGAYGARQRSDSEKKIDLLKFIARTRQRMLRLHVLAKWCQQVPLVNYCQQLGSTLSSHETCFTQTADSLYFMHEGLQQARAPMFDIPSALEVMLTGNYQRLPLCIEDIGSQNKLSPDEEKRALQKLNASVRYKVLVTPRPKEVSNVSVADGIAVFRVDGEFKVLLTLGYRGHLDLWRILHLELLVGDKGGPIKLEERRRFALGDDIERRMAVSENPFMVLYAILHELCISLAMDTIIRQTNVLRQGRWKDAIRSELVSDSTTGQTGSAPLMQLGQDGEYDLSGSRIPGLKINYWLDEKAGGSAESDSSPFIKIEARQDMQIKCQHSLFILDPLTDKEANLSLDLCCIDVEQLILRAIASNRHTRLLDIQRQLSKNVQISQSPKDVILKRDVEIAKDPVKKTEQKDFADCCGNEVLQVRAYGQAYIGLGINIRSGRFLLQSPENILPPSALLDCEEALNKGSITATDVFASLRTRSILHLFAATGSFFGLKVYEKSQGTLKIPKDILHGSDLMVMGFPQCANAYYLLMQLDKDFRPVFHLLETQSDANDKTNTNACTKEALRFNKIDIGQIQISKSESNTNMFDAKLHALQNIGNCDDVMENRLPIQSGIEPLPLLPACSPSFSSVVDEVFEYEHGALAVPNHSLPQTTLQSTSHPGSLSVGFQGVGTRANASIEGASSAYSGSKFAPGVGLNSYLPSNLRHVQSTNAFSSSTVTKSSSIKLPSSNSNHELSSLSSPTENVIADGSKSLQLVPASKINGSINLITMGSDGPSRKRSISDLFLNLPSLQGLKPSSPRKRRRISESMESWSPLQAYSSDSQSRTSLTYGNILAERNNCVPATTYASVLLHVIRHCSLSIKHAQITAQMDSLAIPYVEEVGLRSPSSNLWLRLPFARDDSWKHICLRLGKAGKGVILTYSNVEPDSVQKLVSDLRRLANARSFARGMRRLIGVILNDKLDDDQTSTDIKSQPVNKGNSDAADRLSEQMRKTFRIEAVGLMSLWFSYGTMPMVHFVVEWESAKGGCTMHVSPDQLWPHTKFLEDFVNGGEVASFLDCIRLTAGPLLALGGAIRPARMPVTVSSGYNSMPKQMNNIPTQGPLANGSSSTTMHHAPSPANVAATHVGSHNLHTAAMLSAAGRGGPGLVPSSLLPFDVSVVLRGPYWIRIIYRKKFSVDMRCFAGDQVWLQPATPPKGGPLVGGSLPCPQFRPFIMEHVAQGLNALEPSFMNATQAGAHLNSSAGTLQSAPNANRVNATQGIGMSRPASGVANHVAANLSRAGNAMLASSGLASGIGGASVRLTSGANLPVHVKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFAQLPELLKEILGSILKENEGALLNLDQEQPALRGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQAQNSAQEELAPPEINEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGFSQAHGDIATAQRARIEICLENHSGSVSDDITESTLAKSNVKYDRAHSSLEFALTFVLDHALIPHMNVAGGAAWLPYCVSVRLKYSFGESNHIAYLAMDGSHGGRACWLQYEDWERCKQKVARAVETVNGSVAVGESGQGRLRMVAEMIQKQLQLCLQQLRDGPLSAGSTAS |
Length | 1688 |
Position | Tail |
Organism | Oryza meridionalis |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.184 |
Instability index | 50.65 |
Isoelectric point | 8.44 |
Molecular weight | 184354.35 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP03568
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 296.13| 95| 820| 18| 149| 1
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18- 149 (137.61/167.23) RRAAAESYLSLRELVEKSQDEGEGKGGAYGarqrsdsekkidllkfiartrqrmlrlHVLAKWCQQVPLVNYCQQLGSTLsSHetCftqtadSLYFMHEGLqQARAPMFDIPSALEVML...TGN.YQRLPLCIED
839- 937 (158.52/108.69) RRRISESMESWSPLQAYSSDSQSRTSLTYG...........................NILAERNNCVPATTYASVLLHVI.RH..C......SLSIKHAQI.TAQMDSLAIPYVEEVGLrspSSNlWLRLPFARDD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 255.89| 86| 580| 482| 735| 2
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646- 735 (135.96/292.37) PIQSGiePL..PLLPaCsPSFSSVVDEVFEYEHGAL..AVPNHSLPQTTLQST.....SHPGSLSV.GFQGVG.TRANASIE...GASSAYSGSKFAPGVGLNS
1229- 1328 (119.94/24.40) PPKGG..PLvgGSLP.C.PQFRPFIMEHVAQGLNALepSFMNATQAGAHLNSSagtlqSAPNANRVnATQGIGmSRPASGVAnhvAANLSRAGNAMLASSGLAS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 69.64| 21| 821| 234| 254| 3
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234- 254 (36.39/22.50) IKLEERRRFALGDDIER.RMAV
1095- 1116 (33.25/19.89) IRLTAGPLLALGGAIRPaRMPV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 211.07| 68| 821| 511| 614| 5
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434- 509 (102.22/116.50) EIAKDPVKKTEQ..KDFADCcgnevlqVRAYgQAYIGLGINIRSGRFLLQSPENILPPSALLDC.EEALNKGSITATDV
542- 612 (108.85/81.44) KIPKDILHGSDLmvMGFPQC.......ANAY.YLLMQLDKDFRPVFHLLETQSDANDKTNTNACtKEALRFNKIDIGQI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 76.25| 22| 1041| 305| 329| 6
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305- 329 (32.91/31.79) GQTGSApLMQLGQDGEYdlSGSRIP
1349- 1370 (43.34/27.95) GELNTA.FIGLGDDGGY..GGGWVP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 104.00| 31| 400| 1182| 1225| 7
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1189- 1225 (47.03/58.76) PFDVSVVLRgpYWI....RIIYrkkFSVDmRCFAGDQVWLQ
1592- 1626 (56.97/31.14) PYCVSVRLK..YSFgesnHIAY...LAMD.GSHGGRACWLQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 72.80| 26| 26| 738| 763| 8
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738- 763 (42.82/23.19) P.SNLRH.VQSTNAFSSSTVTK.SSSIKL
764- 792 (29.97/14.19) PsSNSNHeLSSLSSPTENVIADgSKSLQL
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