<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03566
Description |
Uncharacterized protein |
Sequence | MDGGGGGNWRPTQGADPAASGGIDPNAPAPAPAGGDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATSQSDYLRKISLKMLSMETKTQQNPGNAQVIQNQNPPGSVPGLPQGSNPTQSSAIPLMSQQQARQPNSTSVQSSLTNLGQNLPGVNQTSTLQNMSGMPQNTMNNGLAQGASQDIYATQRQMAGRQQQQQQSQNQLIYQQQQIMMKQKLQQNSLMQQQSLLQPTQMQSSQQPMMQIPSGLQPGQSIPQTQPMVQSSSQGGIQQNALNSVPQSVQSLLQQPTQSAMRQQQHSQSSMHPQPSLQQAQPTQQPNIPLQHQLMGQQQNLQQNQLIGQQNGAVDMPQQQRLPVQSNNLLNMQQTQQMLNQQSMPSHQQQQLGSQANISTLQQQQQQNQQQQQLLGTVPNVPNIQRMHMLQTKAVQQPQQQQHAQQSSLGLMQPQSQHNQLQQSQQHLMSQFQAQPNQLQQQLGMPQQPPMQQRLQTSAGMLLQQNNIDQQKQFMQAQRGLQEVSSSTSVDSTAQTGHTGTGTGDWQEEAYQMVKNLKDQYFPELNDLYNKISLKLQHVDNMVPPQKPTDTYEKMKSFKLMLERTMHVLQLNKGNIQPALRDRIPAYERQIISILNSQKRPRVQGQQTQFQQSAGQGPTSNIPQQQQPSQGLQQHDNHTNQMPQASMPSMSTGLQSSGASGIQHLPASPATNFGVPATQQNVTNAPQATSNLEVTQGSNFNSLQHGSMSGALQQGSTGPMQGTLNAQQQASSSMLSHNSVGTMQANANSMQANANSLQQLKQQQQEHHMMQSPQMKRQMFQQFQQKQMLQQQLPAQQQLQKQQQSQMQVPQHHSGNDANELKVRQGAAMKPGIYQQHLAQRNNFYNQQIKQGSAFPISSPQNLQASSPQISHHSPQVDQHNLLPSQVKTGTPLQSANSPYMPSPSPPVAPSPIPVDSEKPLSNLSSSLTNTGQATHQQTNMAPQTQSIAVNTPGISASPLLAEFTSVDGNQANMPTQVLTKSSAAERPLDRLLKALRTTQRQSLSAAVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFITHDGTGTSKKMKRDTSAMPLNVSSAGSVNDSLKQTFNIGTPELQSTATSRVKWQKTEINHALMEEIHEINQQLIDTELHVCEDDVDSFGATSEGTEGTVIKCTFTAVAVSPSLKSMFASAQMSPILPLRVLVPASYPKCSPVLLDKFPDEQRNSDDLSTKARSKFSILLRGLAEPMSLREIARTWDACARKVIAEYAQQTGGGSFSSSYGCWENCVGA |
Length | 1320 |
Position | Tail |
Organism | Oryza meridionalis |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.776 |
Instability index | 72.86 |
Isoelectric point | 9.30 |
Molecular weight | 144709.29 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
|
GO - Biological Function | chromatin DNA binding GO:0031490 IEA:InterPro
transcription coactivator activity GO:0003713 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP03566
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
10| 610.56| 67| 67| 386| 452| 1
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104- 173 (49.31/ 7.42) METKTQQN....PGN.....AQ............viQ...N..............QNppgSV....PGLPQ....GSNPTQSSaipLMSQ...Q..QARQ...PnstsvQSSLTNLGQNL....PG....VN.....
174- 240 (49.98/ 7.64) .QTSTLQN....MSG.....MP..............QNTMNnglaqgasqdiyatQR...QM....AGRQQQQ................Q...Q..SQNQliyQ.....QQQIMMK........QK....LQQ.NSL
241- 302 (65.81/12.91) MQQQSLLQ....PTQ.....MQ............ssQQPMM..............Q.....I....PS.......GLQPGQSI...PQTQ...PmvQSSS...Q..ggiQQNALNSVPQ......S....VQ...SL
303- 359 (69.35/14.08) LQQPTQSA....MRQ.....QQ..............HS.................QS...SM.hpqPSLQQAQP.TQQPNIP....LQHQlmgQ..QQNL...Q.....QNQLIG.....................Q
360- 439 (106.93/26.59) .QNGAVDM....PQQ.....QRlpvqsnnllnmqqtQQMLN..............QQ...SM....PSHQQQQL.GSQANIST...LQQQ...Q..QQNQ...Q.....QQQLLGTVPNV....PN....IQR.MHM
440- 499 (64.07/12.33) LQTKAVQQ....PQQ.....QQ.............hAQ.................QS...SLglmqPQSQHNQLqQSQQHLMS....QFQ...A..QPNQ...L.....QQQ.LG.MPQQ....P............
551- 618 (46.51/ 6.49) TGTGDWQE....EAY.....QM..............VKNLK..............DQ...YF....P.....EL.NDLYNKIS...LKLQ...H..VDNM..vP.....PQKPTDTYEKM....KSfklmLERtMHV
759- 819 (48.40/ 7.11) ..SGALQQgstgPMQgtlnaQQ...........qasSSMLS..............HN...SV....GTMQANAN.SMQANANS...LQQL...K..QQ............QQ....................E.HHM
820- 863 (55.31/ 9.42) MQSPQMKR....QMF.....QQ...........fqqKQML..............................QQQL.PA................Q..QQLQ...K.....QQQSQMQVPQ................HH
864- 932 (54.90/ 9.28) SGNDANEL....KVR.....QG......aamkpgiyQQHLA..............QR...NN....FYNQQIKQ.GSAFPISS...PQNL...Q..ASS..................PQIshhsPQ....VDQ.HNL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 135.96| 25| 26| 648| 673| 2
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648- 673 (40.51/16.77) QKRPRvQGQQTQFQQSAGQGPT.SNIP
675- 698 (42.00/14.59) QQQPS.QGLQ.QHDNHTNQMPQ.ASMP
699- 716 (26.60/ 6.12) S.......MSTGLQSSGASG.I.QHLP
967- 992 (26.86/ 6.26) SEKPL.SNLSSSLTNTGQATHQqTNMA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 60.33| 18| 588| 533| 550| 4
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533- 550 (32.46/19.77) EVSSSTSV.DSTAQTGHTG
1123- 1141 (27.87/15.92) NVSSAGSVnDSLKQTFNIG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 51.26| 15| 28| 1077| 1091| 6
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1077- 1091 (25.17/18.64) GNGSRAAVGEDLVAM
1106- 1120 (26.09/19.63) GTGTSKKMKRDTSAM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.43| 13| 15| 728| 740| 9
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728- 740 (22.64/10.74) TQQNVTNAPQATS
745- 757 (23.79/11.68) TQGSNFNSLQHGS
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