Description | Uncharacterized protein |
Sequence | MEGATAAHPASSSVSAAHWMATEDLGLRRNIINNMVKKFMTITNSQQDHHYREIQNYAIRCEQDALNKTTNKEDYLRCIAQRIMNMEMKVRRSQSLQAGTTPSAQRPSSQQQNVCTTPQNPGQVPDQHRASAPNSQIEASQEQTVMVAAPDCYLNFNTTAISPVAMCVHPSQQPQSQQHQQQAKQLHPTNVVGYNPTSLNQIQGQSVSGQNFQQNHVLGQNASGSGTQQRQLVETPEQHQLLRMKQQHMRGNQQQNFTQRNQILPAQQAHLGKMQIGHPAVKNNQQNVGMSCQPMTPPQCQVATAQQSSLGCDSPQTLEPIVIAGEVDWREEIFQKIKSFKDAYLSEVLEYDQIVHVPKLTEEQLRSLPVENAEKLRRIRHVKKIIAIMLDLLNTQKSNVHKGMQNIFPIFQQYLGQLRLSISKSKARKTVAKIGCQSQNCSENSHIVNLGSNTAPFTCDASRQQKQQEQVISAKTSRMEQAIMTRTPTPQQESHGCHLLGVPSSCFSPKALQPSSTNTIEECFTPSPVTQTVQPIQVTSPHVTSPGAYGKSSVPKPSVARVVSHSASIKSRLASSPSRPEGAHAASPNITSVESTLPTPIAKPGTVRAASPCTPVKSTSQSQLSKPAVTEVDSCRACVTSKLKSPVGKPETAGAASPCASVKSTVSLDVDSVTEFLQHRVVAPTVANGCSSNQAIHTLVSAVPPKAAHQADDQVQNGAEEMEAKKPFSRLIETLLSSSPEALRHSSNSMRLAIWEADRIPAPSPLPYRPRNGKMKRDFDHVTSRPISSPLRSMDESCMTYECVAFEDESSGEYNAKRQKTQVNANDALVDEIKTINNKLVDTVMNIADENGTDEIIYQNGGGMLIKLSYNSMSLSPSLKSLFAASEMTIVMPVKLLVPADYPKSSPILVDNDDEQRRLSDISYAVAVAFGRAVDELLEPRSIEAMAMAWDGCVRRAVTEVAHRHGGGTFSSRHNQWRAG |
Length | 980 |
Position | Tail |
Organism | Oryza meridionalis |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza. |
Aromaticity | 0.04 |
Grand average of hydropathy | -0.534 |
Instability index | 61.67 |
Isoelectric point | 8.74 |
Molecular weight | 107399.06 |
Publications |
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell |
GO - Biological Function | chromatin DNA binding GO:0031490 IEA:InterPro transcription coactivator activity GO:0003713 IEA:InterPro |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP03525 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 5| 160.43| 21| 22| 584| 604| 1 --------------------------------------------------------------------------- 542- 557 (27.45/13.42) HVTSPGAYG.KSSVP....KP 561- 580 (28.90/14.55) RVVSHS.ASIKSRLASSPSRP 584- 604 (36.35/20.41) HAASPNITSVESTLPTPIAKP 608- 627 (36.07/20.19) RAASP.CTPVKSTSQSQLSKP 631- 650 (31.66/16.72) EVDSCR.ACVTSKLKSPVGKP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 77.05| 22| 22| 744| 765| 2 --------------------------------------------------------------------------- 744- 765 (39.13/28.83) RHSSNSMRLAIWEADRIPAPSP 769- 790 (37.92/27.66) RPRNGKMKRDFDHVTSRPISSP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 237.98| 45| 59| 172| 216| 3 --------------------------------------------------------------------------- 105- 160 (55.88/24.57) QRPSSQQQNVCTTPQNPGQVPDQHrasaPNSqIEASQEQTVmvaapdCYLNFNTTA 172- 216 (79.14/37.70) QQPQSQQHQQQAKQLHPTNVVGYN....PTS.LNQIQGQSV......SGQNFQQNH 219- 248 (45.28/18.59) GQNASGSGTQQ.RQLVETP....E....QHQ.LLRM................KQQH 249- 287 (57.69/25.59) MRGNQQQNFTQRNQILPA.....Q....QAH.LGKMQIGHP......AVKNNQQN. --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 248.33| 57| 137| 666| 743| 4 --------------------------------------------------------------------------- 441- 488 (72.01/28.88) .......CSENSHIVNLGSNTAPFTCDASRQQKQQ..EQVISAKT.SRMEQAIMTRTP 490- 541 (83.14/33.20) PqQESHGC...HLLGVPSSCFSPKALQPSS...TNTIEECFTPSPVTQTVQPIQVTSP 684- 740 (93.19/71.03) P.TVANGCSSNQAIHTLVSAVPPKAAHQADDQVQNGAEEMEAKKPFSRLIETLLSSSP --------------------------------------------------------------------------- |
IDR Sequence | Start | Stop |
1) KVRRSQSLQAGTTPSAQRPSSQQQNVCTTPQNPGQVPDQHRASAPNSQIEASQEQ 2) PVAMCVHPSQQPQSQQHQQQAKQLHPTNVVGYNPTSLNQIQGQSVSGQNFQQNHVLGQNASGSGTQQRQLVETPEQHQLLRMKQQHMRGNQQQNFTQRNQILPAQQAHLGKMQIGHPAVKNNQQNVGMSCQPMTPPQC 3) TCDASRQQKQQEQVISAKTSRMEQAIMTRTPTPQQESH 4) TNTIEECFTPSPVTQTVQPIQVTSPHVTSPGAYGKSSVPKPSVARVVSHSASIKSRLASSPSRPEGAHAASPNITSVESTLPTPIAKPGTVRAASPCTPVKSTSQSQLSKP | 89 163 458 517 | 143 300 495 627 |
MoRF Sequence | Start | Stop |
1) LPYRPR | 766 | 771 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab