<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03506

Description Uncharacterized protein
SequenceMEAAAGAGGTIGGSGREAAEEEEDGGEQWLEEEAEAVYCAVGKEAVKEWKANLMWVLAAFPWRRRRSRIVFIHVHRPPSRVNASKIIFSCDDITRGLLQLVDDHGITDLVMGAASDKAYSRKMRAPRSKKARKVQLKASPSCKIWFVCKGNLICTREVNEGLNRTGSSTTSTSPRSSTSDYSRSRSSPRVHSLSSEPFGMQDPAEPTTSSVDQTPIREDNAMDRGTEGFNHEAVAVASSSTAPVSENVEAVQRSAAAVVQSLQEIEEDSPTPSVHGSEDAGDVSDAYDKFKDAVIEAENLRHEAYEETRRRQRVERDLADATRIANEAESSQQREARRRKEVEERLARERAAMEQDRRELDDILEQTRDVDARAAELELHITSSERMMSDLEAKLSESYGLLHQLRRERRRDDAPAEAMAGSEDGEQRLTFLRLGLPELEEATNHFDESVRIGGDVYRGELRSMAVAVKMISRDVAVDEVGFCREVEAMGRARHPNLVTLVGACPEARAVVHEFVPGGSLEDRLAGAAPPLPWHALCGVAHRACSALAFLHSTQPRATVHGDVRPANILLGEECCSSKLAGLGMRRLVRNSGGDVALSRPALGYVDPRHLATGGMTPERDVYALGVVLLRLVTGKPPLMAKQEAREAAAGSKAWHEVFDASSGGWPMEVAREVALVGLKCCGVEEEDPAAGARRPGELLEEACGVLEAAMSAAPGRSWSSVSSSSDGGEGGAPSYFVCPILKEVMRDPQIAGDGFSYEAEAIREWLRSGRDTSPMTNLKLPRRELVPNHPLRDAIHHWRLRRAMRTNFTTTGLDSYYY
Length818
PositionTail
OrganismOryza meridionalis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.05
Grand average of hydropathy-0.503
Instability index61.39
Isoelectric point5.58
Molecular weight89682.49
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03506
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     121.93|      30|      30|     296|     325|       1
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  296-  325 (48.32/25.41)	EAENLRHEAYEETR....RRQRVERDLADATRIA
  327-  352 (40.75/20.32)	EAESSQQ...REAR....RRKEVEERLAR.ERAA
  355-  387 (32.86/15.01)	QDRRELDDILEQTRdvdaRAAELELHITSSERM.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.89|      23|      30|     544|     571|       2
---------------------------------------------------------------------------
  544-  566 (43.37/19.79)	CSA.LAFLHSTQPRATVHGDV...RPA
  575-  601 (31.51/18.56)	CSSkLAGLGMRRLVRNSGGDValsRPA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     148.96|      46|      59|      78|     127|       3
---------------------------------------------------------------------------
   78-  127 (74.74/59.07)	PSrvnaSKIIFSCDD...ITRGLLQLVDDHGITDLVMGA.ASDKAYSRKMRAPR
  140-  189 (74.21/49.12)	PS....CKIWFVCKGnliCTREVNEGLNRTGSSTTSTSPrSSTSDYSRSRSSPR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     179.96|      39|     111|     493|     531|       4
---------------------------------------------------------------------------
  493-  531 (70.51/43.04)	RHPNLVTLVGACPE..AR..AVVHEFVPGGSLEDRLAGAAPPL
  608-  638 (53.25/30.60)	RH...LATGGMTPE...R..DV...YALGVVLL.RLVTGKPPL
  654-  695 (56.20/32.73)	WHEVFDASSGGWPMevARevALVGLKCCGVEEEDPAAGARRP.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.03|      15|      20|     227|     246|       5
---------------------------------------------------------------------------
  196-  210 (26.16/ 7.26)	EPFGMQDPAEPTTSS
  227-  241 (23.87/11.16)	EGFNHEAVAVASSST
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.71|      15|     142|     267|     282|       6
---------------------------------------------------------------------------
  267-  282 (24.98/15.27)	EDSPTPSVHGSEDaGD
  412-  426 (27.72/13.03)	DDAPAEAMAGSED.GE
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     117.85|      34|     734|       1|      48|       7
---------------------------------------------------------------------------
    1-   38 (49.28/25.22)	MEAAAGAGgtIGGSGREAAEEEEDGGEQWLeeEAEAVY
  706-  736 (53.35/18.28)	LEAAMSAA...PGRSWSSVSSSSDGGEG....GAPSYF
  750-  766 (15.22/12.84)	..........IAGDG...FSYEAEAIREWL........
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03506 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) NEGLNRTGSSTTSTSPRSSTSDYSRSRSSPRVHSLSSEPFGMQDPAEPTTSSVDQTPIREDNAMDRGTEGFNHEAVAVASSSTAPVSENVEAVQRSAAAVVQSLQEIEEDSPTPSVHGSEDAGDVSDAYDKFKDAVIEAENLRHEAYEETRRRQRVERDLADATRIANEAESSQQREARRRKEVEERLARERAAMEQDRRELDDILEQT
159
367










Molecular Recognition Features






MoRF SequenceStartStop




NANANA