<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03503

Description Uncharacterized protein
SequenceMYLSAFSSSASSHGGGDSEGRDSSTVVAVDRDKNSQQAAKWAVDRLLARGSVLQLVHVRPQQNAEAGADAEMQQMFISYRGYCARKGMQLKEVILDGSDISKAIVEYAISNAITDIVVGASTRNTFIRKFRNPDVPTCLMKMVPDYCTVHVIHKGKAIQVKAAKAPAPFTTLPPKQYSQSSIESDGYPRSRGDWKKISNQSSPKANRPSVDRLSGFAKAPTRERPLSGARSAPPKDFDDYIDFIAPPRPSVTRSSFSDDVDFPLSLELPSMDFGDSLELSASMSMESLSSAGKDVETEMRRLRLELKQTMEMYNSACKEAIDAKQKAAQMHQMKMEESKKYQELRNAEEEALALVQMEKAKCRAALEAAEAAQRIAELEAQKRLRAEWKAKREAEERKRATDAMNNTDLRYRRYSIDDIEAATHKFDKALKIGEGGYGPVYKAVMDHTNVAIKILRPDASQGRKQFQQEIEVLSCMRHPNMVLLLGACPEYGCLVYEYMDYGSLEDRLCRRGKTLPIPWNIRFRIAADIATGLLFLHQAKPEPLVHRDLKPANILLDHNFVSKISDVGLARLVPQSAAAAEATQYRMTSTAGTFCYIDPEYQQTGMLTTMSDIYSLGILLLQIITARSPMGLTHHVESAIERGTFQEVLDPMVTDWPVEEALVFAKLALQCAELRKKDRPDLGKEILPELNRLRCLGQEYDASKVSSTSTTCSSSAPYSFGADDVSTP
Length728
PositionTail
OrganismOryza meridionalis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.07
Grand average of hydropathy-0.425
Instability index49.78
Isoelectric point7.18
Molecular weight80964.39
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03503
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      71.77|      16|      16|     256|     271|       1
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  237-  251 (19.13/ 9.18)	FDDYIDFiaP...PRPSV
  256-  271 (29.86/18.50)	FSDDVDF..PLSLELPSM
  273-  288 (22.78/12.35)	FGDSLEL..SASMSMESL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     133.49|      43|      44|     311|     353|       2
---------------------------------------------------------------------------
  311-  353 (70.74/43.91)	EMYNSACKEAIDAKQKAAQMHQMKMEE..SKKYQELRNAEEEALA
  356-  400 (62.75/38.17)	QMEKAKCRAALEAAEAAQRIAELEAQKrlRAEWKAKREAEERKRA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     374.66|     124|     460|      44|     183|       3
---------------------------------------------------------------------------
   44-  183 (184.29/183.43)	DRLLARGSVLQL.VHVRpqqnAEAGADAEMQQMFISYRG..YCARKGMQLKEVILDGSDISKaIVEYAISNAITDIVVGA........STRNTFIrkFRNPDV.PTCLMKMVPDYCTVHVIhkgkAIQVKAAKAPAPFTtlppkQYSQSSIE
  506-  641 (190.37/142.65)	DRLCRRGKTLPIpWNIR....FRIAADIATGLLFLHQAKpePLVHRDLKPANILLDHNFVSK.ISDVGLARLVPQSAAAAeatqyrmtSTAGTFC..YIDPEYqQTGMLTTMSDIYSLGIL....LLQIITARSPMGLT.....HHVESAIE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.06|      12|     388|     292|     303|       4
---------------------------------------------------------------------------
  292-  303 (21.67/16.04)	GKDVETEMRRLR
  683-  694 (21.39/15.72)	GKEILPELNRLR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.89|      18|      27|     186|     203|       5
---------------------------------------------------------------------------
  186-  203 (33.88/18.99)	GYPRSRGDWKKISN.QSSP
  215-  233 (27.01/13.78)	GFAKAPTRERPLSGaRSAP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03503 with Med32 domain of Kingdom Viridiplantae
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