<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03498

Description Uncharacterized protein
SequenceMAVASARSSLPSSSSSPLPPLSPQSVVPAGVERMLVRGGGTRSLREIDEEDDDDDGGGKTYVSVGKDLKDGKANIQWAARKLQPQQGDVNKLLVLLHVHQPADRIMSAKSPNLQVQAEILVIEKNNVANGIVELIDQHHITKLVMGTSSFSVKRQVPKSKVAAVVHQQAKPYCQILYICKEALACTREASQFGDKGDSPRSSSGSSLSDKSEFPPRSVSLPSWYSGFLGSPDQQSLPQRSNSISHPFPFSRHLENGVENISPIRPNSVDVAPKGCSPNSSHQSNGVSSLTLTYLDPVDGSSVPVSSSSSEEHQHSMVEANVQNEMFEQWQQVRNELERSRKEASEGRQKAEKELFEASKMFRARENSLCKEKIAVEERLTREKVSLEKEHLQIYNELQKANEQIMELERKLMHANSLMEELQTVQGELQRQKDNAVKEAEKMSQINCNNVSCSTGAVALTEFTYTEIKEATNDFDESKMIGHGGCGSVYKGFLRHTTVAVKKFNREGITGEKEFDDEVEILGRMRHPNLVTLIGVCREAKALVYEFLPNGSLEDRLQCKHQTDPLPWRMRIKIAADICTALIFLHSNKPKSIAHGDLKPDNVLLGDNFVGKLGDFGISRPLNLTNTTITPYHRTNQIKGTLGYMDPGYIASGELTAQYDVYSFGVVLLRLLTGKSPLGLPSEVEAALNNEMLQQVVDASAGEWPPEYSKKLAILALRCCQYDRKERPDLAKEAWGVLQAMVNYPDNKCKIPSFFICPMTQEIMKDPHIAADGFTYEGEAIKDWLQRGHKMSPMTYLSFTHYELIPNNALRFAIQEWQMKQQL
Length822
PositionTail
OrganismOryza meridionalis
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.06
Grand average of hydropathy-0.493
Instability index48.70
Isoelectric point6.23
Molecular weight91586.84
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03498
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     115.20|      26|      30|     248|     276|       1
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  195-  219 (31.61/13.57)	KGDSPRS...SSG.SSLSdksefP..PRSVS
  247-  269 (37.46/26.58)	...FPFSRHLENGVENIS.....PIRPNSVD
  273-  298 (46.13/25.37)	KGCSPNSSHQSNGVSSLT.....LTYLDPVD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     133.63|      29|      30|     324|     352|       2
---------------------------------------------------------------------------
  322-  350 (48.63/31.32)	QN..............EMFEQWQQVR...N.ELERSRKEASEGRQKA
  351-  381 (38.32/23.20)	EK..............ELFEASKMFRareN.SLCK.EKIAVEERLTR
  382-  400 (21.96/10.31)	EK............................vSLEKEHLQIYNELQKA
  401-  441 (24.72/12.48)	N.eqimelerklmhanSLMEELQTVQ...G.ELQRQKDNAVKEAEK.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.66|      19|     207|     585|     603|       3
---------------------------------------------------------------------------
  585-  603 (35.01/21.72)	HSNKPK...SIAHGDLKPDNVL
  788-  809 (31.64/18.97)	HKMSPMtylSFTHYELIPNNAL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.90|      27|      30|     467|     495|       4
---------------------------------------------------------------------------
  467-  495 (44.00/32.46)	IkeATNDFDESKMIGHGGCGSVYK..GFLRH
  498-  526 (40.90/24.09)	V..AVKKFNREGITGEKEFDDEVEilGRMRH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.67|      22|     289|       8|      31|       6
---------------------------------------------------------------------------
    8-   31 (35.35/25.34)	SSLPSSSSSplPPLSPQSVVPAGV
  300-  321 (39.32/21.69)	SSVPVSSSS..SEEHQHSMVEANV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03498 with Med32 domain of Kingdom Viridiplantae
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