<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03467

Description Uncharacterized protein
SequenceMGVKDVRKVKAEKEVFFFTKIDEGLLHLIEIYGVTKLVMGATSDRHYKSFTLSVLIDCDKNMTIFVAQKNESTTITNSNKCDAKSTFILQYMVYLQREANMCQAKRLGCMYINEMELRKETEAKLSQEKEESESLKHATMVLQNDLDWLKYQLNEKANRLQELNQQKHLLEHRISESDSVATYLEESMKVTESRVQSLKLEYSKMKRERDDAVKEARSMRIEQELTNSCAYGAISSEFSLMELEQATQNFSNALNIGQGGFGSVYKGSLRNTTVAIKMLSTDSLHGQSQFHQEVAILSRVRHPNLVTLIGACTEASALVYELLSNGSLEDRLNCVDNTPPLTWQVRIQIITEICSALIFLHKHRPHPVVHGDLKPGNILLDANLQSKLSDFGISRLLLESSVTGSDAHYTSRPMGTPAYMDPEFFATGELTPQSDTYSFGVTIMRLLTGRAPLRLIRTVREALNDDDLQSVLDHSAGDWPLVHVEQLTHIALQCTELSKQRRPDLEHDVWEVIEPMKKEAHSPLSQSFRSICSAIETATPSYFLCPISQVLQVRKVIMRDPQMAADGFTYEADVIRDWLDKGHDRFLSHALPKRSQPGLFLWDRAEAAAREEGEGEEEVRRLRAAAAERFLAAAKLDPNDGVPFRFLGHHYARAGDAQRAAKCYQRAATLNPDDAEAGEAVCDLLDLEGKESLEIALCKEAAGKSPRAFWAFRRLGYLQALGLAYHRLGMFTAAVKSYGRAVELDGSKVFALIESGNIQLMLGYFRKGVEQFHSALEMAPQNHSAYFGLASALLAWARQCVMTGAFGWAASLLKLALARCFPWDDGNIKGGMDDGTFRTTVLEWRNTCLLAANGAKFSYQRALHLTPWEANIHNDTAICLDLIYTIEENNSLDPITWELPEKMSLGGLILEPVNKDFWVTLGSVSSNQALKQHSFIRALHLDMSLSEAWAYLGKLPEFQIGLGTIAARSGELLSPQVLMAVRQAVQRAPHYPESHNINGLVSEVRSDFQSAIASYRRAKFALDMMRNSKADCRCHIADISVNLARSLCKAGLATEAVRECEELKRQGFLNDDGLQIYALSLWKLGRHDEALSVSRNLAENLSSMKQESATAALGFICTLTYNISGKDSAAAVIHKLPGQLNYSTQLKFIISALDALQPNKRFQLPQLSMPPRLTSYEVMSEVHSNIALGNAIAGESDKFLRVDGGLSYLKKVLRMYPDCSLVRNQLGSLLLSSEDWMASHKAVRVTSLSQGYTSDRGLRSPHQIQACAAVSCYATCTSYPKFSFPTCEDQYLSGYNAICRLQRWVHLEPWNQDARRLLVLTLFQKAREEKYPKHICTILKRLILQVLSSGSNSQDNKVVQYGNYLLLLVASEVSLQSGDHGNCIAQATEALGVTSSSVDSFFAHLQLCRAYVIQGNLLNSRSEYMKCLQNRTDTEIGWVVLKQLASICSLEGTPDEIEIHLRGCVERKGSNASKWTSLFYLACAQCSVWNEDFASAEKAIAQACAEGDPDSCVLFLNGAICMDIAWRFAAPQFIARAASSLRKAQQKSLASLPIVSLLLAQAEGSLGSKAKWEKNLRLEWFSWPPELRPAELYFQMHLLATQSNAATSQQNQLVETMQTPEKWLLRAIHLNPSCSRYWTALMQLVYV
Length1647
PositionTail
OrganismOryza glumipatula
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.08
Grand average of hydropathy-0.202
Instability index48.94
Isoelectric point6.55
Molecular weight184146.41
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03467
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     209.91|      57|      59|     564|     622|       1
---------------------------------------------------------------------------
  564-  622 (92.66/62.11)	AADGFTYEADVirDWLDKGHDRFLSH..ALPKRSQPGLF.LWDRAEAAAREEG..EGEEEVR.RL
  626-  684 (96.28/58.86)	AAERFLAAAKL..DPNDGVPFRFLGHhyARAGDAQRAAK.CYQRAATLNPDDA..EAGEAVC.DL
  851-  882 (20.97/ 6.20)	.................................AANGAKfSYQRALHLTPWEAniHNDTAIClDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     147.38|      42|      55|    1424|    1466|       2
---------------------------------------------------------------------------
 1424- 1466 (72.94/49.89)	YMKCLQNRTDTEIGWVVLKQLASICSlEGTPDEIEIHLRG..CVE
 1480- 1523 (74.44/46.65)	YLACAQCSVWNEDFASAEKAIAQACA.EGDPDSCVLFLNGaiCMD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.23|      34|      55|    1020|    1056|       3
---------------------------------------------------------------------------
 1020- 1056 (52.36/38.91)	FALDMMRNSKADcrcHIADISVNLARSLC..KAGLATEA
 1077- 1112 (51.88/29.17)	YALSLWKLGRHD...EALSVSRNLAENLSsmKQESATAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     144.28|      45|      56|    1173|    1219|       4
---------------------------------------------------------------------------
 1173- 1219 (68.85/58.91)	LTSYEVMSEvHSNIALGNAIAG.ESDKFLRVDGGLSYLKKVlRMYPDC
 1231- 1276 (75.43/54.51)	LSSEDWMAS.HKAVRVTSLSQGyTSDRGLRSPHQIQACAAV.SCYATC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      51.20|      14|      20|     188|     201|       6
---------------------------------------------------------------------------
  173-  185 (14.47/ 7.45)	.R......ISESDSVATYLE
  188-  201 (22.96/16.63)	MK......VTESRVQSLKLE
  205-  222 (13.76/ 6.68)	MKrerddaVKEAR..SMRIE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.86|      21|     179|     935|     964|       8
---------------------------------------------------------------------------
  935-  955 (38.39/38.31)	FIRALHLDMSLSEAWAYLGKL
 1624- 1644 (40.47/19.01)	LLRAIHLNPSCSRYWTALMQL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03467 with Med32 domain of Kingdom Viridiplantae
Unable to open file!