<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03442
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAGELGQQTVELGAVVRRAAEDSYLALRELVEKSRVEAEGKNGQQRSDTEKKIDLLKFIDRTRQRMLRLHVLAKWCQQVPLVHYCQQLASTLSSHETCFTQTADSLFFMHEGLQQARAPIFDVPSAIEVLHTGSYRRVPKCVEEIGTQNTLFQDEQKPTLKKLSTLVRAKLLEISLPKEISEVSVTDGIANVQVDGEFKVLITLGYRGHFSLWRILHMELLVGEKAGPIKLEETRRYALGDDIERRMAVADNPFMILYTILHELCISLVMDTVIRQTNVLRQGRWKDAIKSELISDIGTGQGGSNAVMQLGQDGELDSSGSRIPGLKINYWLEGKNNASAESDSSPYIKIEAEQDMQIKCQHSSFVLDPFTDKEADLSIDLSCIDVEALILKAIACNRHTRLLEIQRELMKNVQMSQSPTEVILKREVHGEGFQKRVHRRDSNDCCTNEMLQVRAYGQSYIDLGINISNTLVKVPNILHYESIVILVYSQSQVTLKIPKSILCGSEFMVMGFPQCANAYYLLMQLDKSFKPVFCLLEIQSNEGDNNNADATTDAKEAIRFIRIDINKLKIDEDVQIGNFFDKDKLLALQNVEDRPQRQSGADEPLPARPSFFSVVDEVFRCDRGSPITESQRLPPNSLPSSHSSYQVGLHGFSGGAGSPDQDYGSLQSNINAAKVTSGTGLNNYLLSNSKNAQSTSAFSGSVPAGLGNVSSSRSEGAYKKRSLSEFLQNIPSSKQSIIGDGPGKRRKLSEFMLDGLPLKANSPNMQPGTSLTYGKLLEEVNNCITANIYSSVLLHVIKHCSICIKYAQLTAQMDSLNIPHVEEVGMPTSSSNLWLRLPFAHDASWKHICLHLGKAGSMSWDVRINDPHYGALWKLHGGSTTTEWGSGVRVANTSEVDSHISFDDDGVLLTYNTVEADSIQRLVSDLQRLSHARAFSCGMRRLIGVTLDGKLAEHQTAAETKLHSRRKASRDRLSEQMRKTFRIEAVGLMSLWFSYGAVPMVYFVVEWETGKSGCTMRVSPDQLWPHTKFLEDFVNGDEIASFLDCIRLTAGPLLALGGAIRPAKMPVTVPAGYSALPKQNNILTTAGSANSLSSSTVHNMSVPQGAAVAHSNSQLQTSSMLSVAGRTAPGLVPSSLLPFDVSVVLRGPYWIRIIYRNKFSVDMRCFAGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQGLNALEPNLLNARHTGPPLNASANTVSGNQQLASAPNRFGGAPGVARPTSTVANQVASSLSRAGNAMMPSGFASGIAGAPAHLSPGNVPAHMKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFAQLPDLLKEILGSVLKDNEGALLNLDHEQPALRFFVGGYVFAVSVHRVQLLLQVLNVKRFHHQQQQQQQTPQNNGQEELTVPEISEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFIKLIAWKKSLPQAHADNATTHRARIEICLEKHPRLVSDDYTASSSSSKSNIHHDRANNSVDFALTFVLDQALVPHMSISGGAAWLPYCVSVRVRYTFGEDSHIAFLAMDGSHSGRACWLQNEDWERCKQRVSRAVETMNGSAAVGDMSQGRLRMVAEMVQKQLQLSLLQLRDSPVSTGSAAS |
Length | 1644 |
Position | Tail |
Organism | Oryza glumipatula |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.208 |
Instability index | 49.39 |
Isoelectric point | 7.28 |
Molecular weight | 180751.92 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP03442
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 94.18| 22| 23| 706| 728| 1
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681- 699 (30.22/12.78) LNNYLLSN....SKNA...QSTSAFS
706- 727 (38.12/19.59) LGNVSSSR....SEGAYKKRSLSEFL
729- 752 (25.84/12.48) ..NIPSSKqsiiGDGPGKRRKLSEFM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 59.41| 20| 24| 1235| 1257| 2
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1235- 1257 (32.16/25.52) QLASAPNRFGGA..P.GVArptSTVA
1259- 1281 (27.25/13.09) QVASSLSRAGNAmmPsGFA...SGIA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 62.66| 20| 25| 841| 864| 3
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841- 864 (31.26/32.65) H.DASWKhicLHlGKAGSMSW..DVRI
868- 890 (31.40/17.77) HyGALWK...LH.GGSTTTEWgsGVRV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 293.44| 103| 115| 180| 294| 4
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180- 292 (150.70/121.48) ISEVSVTDGIAN..VQV..DGEfkvLITLGYR..G.HFSLWRILHMELLVGEKAGP.IKLEETRRYALgdDIERRMAVADnPFMilyTILHELCISL....VMDTVIRQTNVLRQGRWKDaIKSE
294- 408 (142.74/92.57) ISDIGTGQGGSNavMQLgqDGE...LDSSGSRipGlKINYWLEGKNNASAESDSSPyIKIEAEQDMQI..KCQHSSFVLD.PFT...DKEADLSIDLscidVEALILKAIACNRHTRLLE.IQRE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 129.80| 37| 59| 1411| 1447| 5
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1411- 1447 (65.11/38.65) PQNNGQEELTVPEISEICDYFSRRVASEPYDASRVAS
1473- 1509 (64.69/38.36) PQAHADNATTHRARIEICLEKHPRLVSDDYTASSSSS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 32.38| 10| 21| 1323| 1332| 6
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1323- 1332 (16.31/10.17) LKKVLRGILK
1347- 1356 (16.07/ 9.90) LKEILGSVLK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 91.08| 23| 24| 468| 490| 7
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448- 468 (26.82/18.91) NEMLQVRA....YgQSYIDLGINIS
469- 491 (36.65/29.20) NTLVKVPN.ILHY.ESIVILVYSQS
492- 514 (27.61/19.74) QVTLKIPKsILCG.SEFMVMGFPQ.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.25| 12| 24| 1282| 1293| 8
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1282- 1293 (23.40/11.26) GAPAHLSPGNVP
1308- 1319 (25.85/13.24) GDDGGYGGGWVP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 68.17| 18| 30| 619| 636| 9
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619- 636 (34.93/22.64) FRCDRGSPITESQRLPPN
652- 669 (33.24/21.12) FSGGAGSPDQDYGSLQSN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 50.02| 15| 15| 1087| 1101| 12
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1087- 1101 (25.34/14.21) GSANSLSSSTVHNMS
1105- 1119 (24.68/13.65) GAAVAHSNSQLQTSS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 48.63| 15| 15| 769| 783| 13
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769- 783 (26.13/16.26) TSLTYGK.LLEEVNNC
785- 800 (22.49/13.02) TANIYSSvLLHVIKHC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 138.74| 43| 407| 1121| 1174| 15
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1121- 1174 (60.18/61.86) LSVAGrtapGlvpSSLLPFDVSVVLRGPYW..IRIIYrnkFSVDmRCFAGDQVWLQ
1538- 1582 (78.56/46.19) MSISG....G...AAWLPYCVSVRVRYTFGedSHIAF...LAMD.GSHSGRACWLQ
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