<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03438

Description Uncharacterized protein
SequenceMVPAGGGGGELERRVMAALKASEARGDQPLVWAVEVARVVAGEGAGLPSADLAGILVSNLCFAHNSPSLWKLVGHAVASRLLCPLHVLALLTPRVLPQRRAQPEAYRLYLELLRSNVTSSFLSMEAGPNRDKITKSIDDALQLSKIYGFSGIDNGHVIIFFMMFVITKLIDCTLEDCGFPSGLTEEQGSIYAIEGPQDMDLDVKGVSTEKQNEHRAQLRRKNTVMALDVLIMMVADRKIQSFLRLIFLNMPEKFSVLSQRLSLVEAHKMELETLLTANHKIDDLLMNMRRVSNTAYQPNNKRLLGVLGNIKYGGSMLGQFTGAGRAACWVIFDIYVENAIDGKHLSAISAIEVLKEMTKTLQAINEASWQETFKALWISALRLVQRAREPLEGPIPHLDSRLCMLLALIPLSIGAILKEETDVHGAQGSKSLPKTSGLVSSLQDLIQYSGLLVPPSSVVNAANAAASKAAAFKANYKSGGGNPGMMGQNDSSTKTVGNMLHLIVEACISRNLIDTSSYLWPGYVVSSGHLKDATLPQESPWLNFIQGAPLSGPLIDALIATPASSTTELDRLYHIALNGSEEEKSAAAKILCGASFVCGWNIQEYVVRMVVKLLSPPLPSNSSTQGSMSHYLAQMSTLNALLLGISYGDAIHIISLYGMVPDVAAALMPICEVFGSIPPPSNHKPAIVGEISVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVRLELTLDYLLLMRNNHIDFANSSASSRNSSNNIGPLNEVPAQPLYIDSFPKLRAWYFQNQACIASTLSGLCNKNPVHQVANKILSMICRKMNKPVVSSGNLSSTSSSSVSGSSVSTQDDYQRPTVPAWEFLEAVPFVLEAVLTACAHGRFSSRDLTTSLRDLVDFLPASIAAIVSYFLAEITRGIWKMVPMNGTEWPSPGASLHSIEAEIKEILASAGIQIPSCYPRGVPPMLPLPMAALVSLTITFKLDKSSEYIHAISGQALENCAGGSSWPSMPIIAALWTQKVRRWHDFIILSCLRSPFGRDKDAVAQLIQSCFSSFLRSSCSGSDFTANRGVGALMGDAITGQGLQLPMAPGFIYLRTCRTFHDTYFVSEVILKQVIEWADKLANGFSSSGPPQLKSGRTPLSSAACMAHQVAMLGGGLLCVAGGPLLVQVLYEETLPTLLLSAREESMKDPGPVSSTLQGYAMANMLFFCGSLLWGAERTSPVMKLSFLSRRPRVVGNHMDFMAGVLDGHILLGCDHGTWKAYVSRFVFLVVKFVPSWLRDIKLDTLKKIASGLRSWNEHDLALALLEQGGPQAISTVVDTLL
Length1315
PositionTail
OrganismOryza glumipatula
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.07
Grand average of hydropathy0.148
Instability index48.99
Isoelectric point7.87
Molecular weight142643.72
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03438
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     406.65|     129|     502|     592|     745|       1
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  592-  745 (196.63/190.64)	CgASFVCGWNIQEYVVRMVV....KL.......LSPPLPSNSSTQGSMSHYLAQMSTLNALLLGISyGDAIHIISLYGmvPDVAAALMPICEvfGSIPPPSNHKPAIVGeisvYSVFSCAFLCLLRLWkfykppqeyclagrgGSVRLELTLDYLLLMR.....NNHIDF
 1090- 1234 (210.01/139.99)	C.RTFHDTYFVSEVILKQVIewadKLangfsssGPPQLKSGRTPLSSAACMAHQVAMLGGGLLCVA.GGPLLVQVLYE..ETLPTLLLSARE..ESMKDPGPVSSTLQG....YAMANMLFFCGSLLW...............GAERTSPVMKLSFLSRrprvvGNHMDF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     113.11|      46|     556|     354|     441|       2
---------------------------------------------------------------------------
  367-  382 (12.48/44.35)	.................................ASWQE..TFKALWISALR
  407-  437 (34.92/14.01)	ALIPLSIGAILKEETD.VHGAQGsKSLPKTSG...................
  965- 1014 (65.72/27.14)	ALVSLTITFKLDKSSEyIHAISG.QALENCAGgSSWPSmpIIAALWTQKVR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     124.29|      40|     156|      77|     116|       3
---------------------------------------------------------------------------
   77-  116 (70.47/49.95)	VASR.LLCPLHVLALLTPR...VLPQRRAQPEAYRLYLE.LLRSN
  234-  278 (53.82/36.20)	VADRkIQSFLRLIFLNMPEkfsVLSQRLSLVEAHKMELEtLLTAN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.92|      11|     156|     383|     395|       4
---------------------------------------------------------------------------
  383-  395 (16.17/13.25)	LVQRArePLEGPI
  544-  554 (21.75/10.98)	FIQGA..PLSGPL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     156.11|      49|     374|     863|     912|       6
---------------------------------------------------------------------------
  863-  912 (77.91/55.98)	VLEA.VLTACAHGRFSSRdLTTSLRDLVDFLPASIAAIVSYFLAEITRGI..W
 1238- 1289 (78.20/51.36)	VLDGhILLGCDHGTWKAY.VSRFVFLVVKFVPSWLRDIKLDTLKKIASGLrsW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.07|      20|     560|       3|      23|       7
---------------------------------------------------------------------------
    3-   23 (30.62/23.24)	PAgGGGGELERRVMAALKASE
  562-  581 (35.44/21.76)	PA.SSTTELDRLYHIALNGSE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.70|      10|      72|     765|     783|       9
---------------------------------------------------------------------------
  774-  783 (20.80/ 7.25)	SFPKLRAWYF
  847-  856 (20.91/ 9.82)	QRPTVPAWEF
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03438 with Med33 domain of Kingdom Viridiplantae
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