<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03395

Description Uncharacterized protein
SequenceMEAAAGAGGAIGGSGREAAAEEEDGGEQWLEEEAEAEAVYCAVGKDAVKEWKANLMWVLAAFPWRRRRSRIVLIHVHRPPSRVNMMGAWVPVSQLAEEEVNAYRQLEEERISKVLDDLLDICKTWVANKVAEKNSQVNASKIIFSCDDIARGLLQLVDDHGITDLVMGAASDKAYSRKMRAPRSKKARKVQLKASPSCKIWFVCKGNLICTRKVNEGLNRTGSSTTSTSPRSSTSDYSRSRSSPRVHSLSSEQFGMQDPAEPTTSSVDQTPIREDNAMDRGTEGFNHEAVAVASSSTVPVSENVEAVQRSAAAVVQSLQEIEEDSPTPSGHGSEDAGDVSDAYDKFKDAVIEAENLRHEAYEETRRRQKVERDLADATRIANEAESSQQREARHRKDVEERLARERAAMEQDRRELDDILEQTREVDARAAELELQITSSERMMRDLEAKLSESYDLLHQLRRERRRDDVPAEAMAGSEAGDQRLTFLRLGLPELEEATNHFDESVRIGGGDGSRGSVYRGDLRSMAVAVKMIGRDVAVDEVGFCREVEAVGRARHPNLVTLVGACPEARAVVHEFVPGGSLEDRLAGAAPALPWHALCGVAHRACSALAFLHSTQPRATVHGDVRPANILLGEECCSSKLAGLGMRRLVRSSGGVALSRPAVGYVDPRHLATGEMTPERDVYALGVVLLRLVTGKPPLMAKQEAREAAGGSKAWHEVFDASSGGWPLEVAREVALVGLKCCDVEEEPAGARRPGELLEEACGVLEAAMSAAPGRSWSSVSSSSDGGEGGAPSYFVCPILKEVMRDPQIAGDGFSYEAEAIREWLRSGRDTSPMTNLKLPRRELVPNHPLRDAIHRWRLRRAMRTNFTTGLDSYYY
Length876
PositionTail
OrganismOryza glumipatula
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.05
Grand average of hydropathy-0.483
Instability index58.64
Isoelectric point5.57
Molecular weight96020.66
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03395
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     194.64|      46|      46|     357|     402|       1
---------------------------------------------------------------------------
  107-  140 (26.55/ 9.00)	......EEERISKVLDDLLDicKTW..VANKvAEKNSQVNAS...........
  357-  402 (76.51/38.00)	RHEAYEETRRRQKVERDLAD..ATR..IANE.AESSQQREARHR..KDVEERL
  404-  451 (58.01/27.26)	RERAAMEQDRRE..LDDILE..QTRevDARA.AELELQITSSERmmRDLEAKL
  458-  484 (33.58/13.08)	LHQLRRE.RRRDDVP.......AEA..MAG..SEAGDQR..............
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     107.05|      22|      59|     704|     725|       2
---------------------------------------------------------------------------
    2-   26 (30.69/13.74)	EAAAGAGgaiGGSGREAAAEEEDGG
  704-  725 (38.02/18.84)	EAREAAG...GSKAWHEVFDASSGG
  766-  787 (38.34/19.07)	EAAMSAA...PGRSWSSVSSSSDGG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      24.38|       6|     161|     569|     601|       5
---------------------------------------------------------------------------
  562-  567 (12.99/22.29)	LVGACP
  586-  591 (11.39/ 9.29)	LAGAAP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     178.75|      57|      70|     216|     274|       7
---------------------------------------------------------------------------
  216-  274 (91.64/63.44)	EGLNR..TGSSTTSTSPRSSTSDYSRSRSSPRVHSLssEQFGMQDPAEPTTSSVDQTPIRE
  283-  341 (87.11/54.41)	EGFNHeaVAVASSSTVPVSENVEAVQRSAAAVVQSL..QEIEEDSPTPSGHGSEDAGDVSD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03395 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) NEGLNRTGSSTTSTSPRSSTSDYSRSRSSPRVHSLSSEQFGMQDPAEPTTSSVDQTPIREDNAMDRGTEGFNHEAVAVASSSTVPVSENVEAVQRSAAAVVQSLQEIEEDSPTPSGHGSEDAGDVSDAYDKFKDAVIEAENLRHEAYEETRRRQKVERDLADATRIANEAESSQQREARHRKDVEERLARERAAMEQDRRELDDILEQT
215
423










Molecular Recognition Features






MoRF SequenceStartStop




NANANA