<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03391

Description Uncharacterized protein
SequenceMDGVGLGVHRRWDTSGSGSQYSFRTSVSSVAEISTEVGVEVRPPPPPLAAAADKVFVAVAADVKYGKSALQWALQNLAKDGAKVVIAHVHCPAQMIPMMGAKVHYTKMNTKQVNDYRNKEREKAEEKLDEYLLICRKLKVSCEKLIIEEDDIAKGLADLVALHGVTKLVMGAAADKHYSRKMNTPKSKTALKILEAADPSCKIWFTCKGHLICTREANTTVPAIPPSPAHTVASTLSSSSISSRMRSMSLHPSESEASSSSGSPRHNLNRSRTEVAKYPSQGSGTAPSQLFGHSDQDVNDQPTRTAMGSIDSWDEFERSQNSCYDSSRNSDTVRVSGSAMQQPMYEPDDDHFVSPRKLENSGDDADIYGRLQEALSETQDLKRETYEESTKRRNAERNLISALQKASHFASKVKELENLYQKEVMHRKITEEALEKQIQETEETERHCNALYDKLHDVEEQKLMVEQHITEMEAVLKEREDRLHDVEEQKFTVEQRITEMQAVLKEHKDKLHDVEEQKLMAEHRITEIRSVLKEREEKLAESKYLLQVLQADKEKLQQERDAAVSESQDLRLKNKQRISMPGEDLNTEFSSYELEQATRGFDQELKIGEGGFGSVYKGTLRNTTVAIKLLHPHSMQGQSEFDQEIAVLSRVRHPNLVTLIGSCREAFGLVYEFLPKGSLEDRLACLNNTPPLTWQVRTKIIYEMCSALSFLHSNKPHPIVHGDLKPANILLDANFVSKLGDFGICRLLIQTNTGAAAAATTRLYRTTTPKGTFAYMDPEFLTTGELTPRSDVYSLGIIILRLLTGKPPQKIAEVVEDAIESGGLHSILDPSAGSWPFVQANQLAHLGLRCAEMSRRRRPDLATDVWKVVEPLMKAASLTAGRPSFVARPDDSPPPSYFVCPIFQEEMNDPHIAADGFTYEAEAIKGWLDSGHDTSPMTNLTLEHRELIPNRALRSAILEWRQQRQRHQQQEEDDDCT
Length977
PositionTail
OrganismOryza glumipatula
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.06
Grand average of hydropathy-0.572
Instability index50.59
Isoelectric point5.89
Molecular weight109577.49
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



ECO:0000256	ARBA:ARBA00003861

GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03391
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     167.10|      27|      27|     465|     491|       1
---------------------------------------------------------------------------
  427-  463 (24.96/13.53)	..RKITEeaLEKQIQETEeterhcnalyDKLHDVEEQKL
  465-  491 (52.59/37.25)	VEQHITE..MEAVLKERE..........DRLHDVEEQKF
  493-  519 (51.23/36.08)	VEQRITE..MQAVLKEHK..........DKLHDVEEQKL
  521-  544 (38.31/24.99)	AEHRITE..IRSVLKERE..........EKL...AESKY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.06|      10|      22|     291|     300|       2
---------------------------------------------------------------------------
  291-  300 (18.70/11.47)	FGHSDQDVND
  316-  325 (19.36/12.13)	FERSQNSCYD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.45|      23|      52|     579|     616|       4
---------------------------------------------------------------------------
  579-  616 (31.92/44.30)	SMPGEdlnTEFssyeleqatrgfDQELK.............IG..EGGFGSVY
  634-  671 (30.53/14.60)	SMQGQ...SEF............DQEIAvlsrvrhpnlvtlIGscREAFGLVY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     121.70|      38|      72|      75|     112|       5
---------------------------------------------------------------------------
   75-  103 (44.54/28.35)	...............................................QNLAKDGAKVVI...AHVHC........PAQMIPMMGAKV
  104-  174 (36.97/22.25)	HYT.KMNTKQvndyrnkerekaeekldeyllicrklkvscekliieeDDIAKGLADLV.....ALHG........VTKLV..MGAAA
  177-  230 (40.19/24.84)	HYSrKMNTPK..............................sktalkiLEAADPSCKIWFtckGHLICtreanttvPA..IPPSPAH.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     120.16|      38|      51|     795|     838|       6
---------------------------------------------------------------------------
  795-  838 (58.18/44.35)	LGIIILRLLTGKPPQ...KIAEVVEDAIESGGLhsildpSAGSWPFV
  846-  886 (61.98/34.66)	LGLRCAEMSRRRRPDlatDVWKVVEPLMKAASL......TAGRPSFV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      33.98|      10|      72|     254|     263|       8
---------------------------------------------------------------------------
  254-  263 (16.07/ 7.18)	ESEASSSSGS
  274-  283 (17.91/ 8.72)	EVAKYPSQGS
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     177.56|      53|      60|     672|     726|       9
---------------------------------------------------------------------------
  672-  726 (91.27/58.67)	EFLPKgsLEDRLAC..LNNTPPLTWQVRTKIIYEMCSALSFLHSNKPHPIVHGDLKP
  734-  788 (86.29/49.77)	NFVSK..LGDFGICrlLIQTNTGAAAAATTRLYRTTTPKGTFAYMDPEFLTTGELTP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.01|      18|      29|     331|     349|      10
---------------------------------------------------------------------------
  331-  349 (28.89/24.10)	DTVRVSGSaMQQPMYEPDD
  363-  380 (30.12/19.80)	DDADIYGR.LQEALSETQD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03391 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) SISSRMRSMSLHPSESEASSSSGSPRHNLNRSRTEVAKYPSQGSGTAPSQLFGHSDQDVNDQPTRTAMGSIDSWDEFERSQNSCYDSSRNSDTVRVSGSAMQQPMYEPDDDHFVSPRKLENSGDDADIYGRLQEALSETQDLKRETYEESTKRRNAERNLIS
240
401










Molecular Recognition Features






MoRF SequenceStartStop




NANANA