<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03385

Description Uncharacterized protein
SequenceMYLSAFSSSASSHGGGGDSEARDSSTVVAVDRDKNSQQAAKWAVDRLLARGGVLQLVHVKPQQNAEAGADAEMQQMFISYRGYCARKGMQLKEVILDGSDISKAIVEYATSNAITDIVVGASTRNTFIRKFRNPDVPTCLMKMVPDYCTVHVIHKGKAIQVKAAKAPAPFTTLPPKQYSQSSIESDGYPRSRGDWKKISNQSSPKANRPSVDRLSGFAKAPTRERPLSGARSAPPKDFDDYIDFIAPPRPSVTRSSFSDDVDFPLSLELPSMDFGDSLELSLSASMSMESLSSAGKDVETEMRRLRLELKQTMEMYNSACKEAIDAKQKAAQMHQMKMEESKKYQELRNAEEEALALVQMEKAKCRAALEAAEAAQRIAELEAQKRLRAEWKAKREAEERKRATEAMNNTDLRYRRYSIDDIEAATHKFDKALKIGEGGYGPVYKAVMDHTNVAIKILRPDASQGRKQFQQEIEVLSCMRHPNMVLLLGACPEYGCLVYEYMDYGSLEDRLCRRGKTLPIPWNIRFRIAADIATGLLFLHQAKPEPLVHRDLKPANILLDHNFVSKISDVGLARLVPQSAAAAEATQYRMTSTAGTFCYIDPEYQQTGMLTTMSDIYSLGILLLQIITARSPMGLTHHVESAIERGTFQEVLDPMVTDWPVEEALVFAKLALRCAELRKKDRPDLGKEILPELNRLRCLGQEYDASKVSSTSTTCSSSAPYSFGGDDVSTP
Length731
PositionTail
OrganismOryza glumipatula
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.07
Grand average of hydropathy-0.427
Instability index50.14
Isoelectric point7.52
Molecular weight81193.67
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03385
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      73.79|      16|      16|     257|     272|       1
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  238-  252 (19.35/ 8.97)	FDDYIDFiaP...PRPSV
  257-  272 (30.93/18.74)	FSDDVDF..PLSLELPSM
  274-  288 (23.52/12.49)	FGDSLEL..SLSASM.SM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     133.49|      43|      44|     314|     356|       2
---------------------------------------------------------------------------
  314-  356 (70.74/47.47)	EMYNSACKEAIDAKQKAAQMHQMKMEE..SKKYQELRNAEEEALA
  359-  403 (62.75/41.27)	QMEKAKCRAALEAAEAAQRIAELEAQKrlRAEWKAKREAEERKRA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     382.41|     125|     462|      45|     184|       3
---------------------------------------------------------------------------
   45-  184 (191.91/153.83)	DRLLARGGVLQLvhvkPQQ.NAEAGADAEMQQMFISYRG..YCARKGMQLKEVILDG......SDISKA.IVEYATSNAITDIVVGASTRNTFIrkFRNPDV.PTCLMKMVPDYCTVHVIhkgkAIQVKAAKAPAPFTtlppkQYSQSSIE
  509-  644 (190.50/119.37)	DRLCRRGKTLPI....PWNiRFRIAADIATGLLFLHQAKpePLVHRDLKPANILLDHnfvskiSDVGLArLVPQSAAAAEATQYRMTSTAGTFC..YIDPEYqQTGMLTTMSDIYSLGIL....LLQIITARSPMGLT.....HHVESAIE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.90|      12|     706|       7|      18|       4
---------------------------------------------------------------------------
    7-   18 (23.54/12.52)	SSSASSHGGGGD
  716-  727 (24.36/13.18)	SSSAPYSFGGDD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.89|      18|      27|     187|     204|       5
---------------------------------------------------------------------------
  187-  204 (33.88/23.00)	GYPRSRGDWKKISN.QSSP
  216-  234 (27.01/16.76)	GFAKAPTRERPLSGaRSAP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03385 with Med32 domain of Kingdom Viridiplantae
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