Description | Uncharacterized protein |
Sequence | MATAAPDAAAPAAEEPLQSEASADPAAESEGASDSGAVAAATPAAVDGAADGDASTAPAPASSFSATPPPMPANPVPPATPGPPRPPFGAPPAYGSPQAPAFSYNVLPRAPPRPQAMTAPSLPAAALQPPVPVQYFGNRPSFSYNVVSQSNTGLPTGQQFQLDTGTNHAAQRFVPPTSLQPPAPMSLARPSSAFPGAGAMPPNPPGSIRLPFPVPPRPSSNTFVASPQQAQPQTSQLPLNTGSSDVSTSQSHTRSVPEASQTMQLSTGPPSTSTTGSPSIAVQMPTNSSFPTRPEVFGGVGASVPVQPSTILSTPPSLFGRPMAPSASAFPQTSQSVAAPSAFPQTGQQQFHPSYPSAHGTVPSQPLWGYPPQPTGFQQPPFQSYPPGPLGPGRPMFGSSAVPNIQPPGVSTDRDSKELSTTNSGSEQPTHASAELSSTVHGSQNSGQPEDKKTTSIQDSDAWSAHKTEAGVVYYYNALTGESTYQKPPGYKGEAEKIAAQPIPVAWDKLAGTDWSIVTTSDGKKYYYDNKQKVSSWQLPAEVSELIKNAESGPLKGSSALLQDAGTVGNKGEISIDINTPAVQTGGRDSLPLRQTVAPASPSALDLIKKKLQDAGASSVPSPLATPSSASELNGSKTTDAAPKGQQVPISGEKSKDNSGDGNMSDSSSDSDDEEHGPSKEDCIRQFKEMLKERGVAPFSKWEKELPKLVFDPRFKAIPSHSRRTIFDHYVRTRADEERKEKKAAQRAAVEAYKQLLEEVSEDINSNKDYQEFKRKWGTDPRFEALDRKEREALFNEKVKSIEEKVQSLRNAVITEFKSMLRESKDITSTSRWTKVKENFRSDARYKAMKHEEREDAFNEYVAELKSAEKEAEQAAKAKLDEQAKLKERERETRKRKEREEQEMERVKLKIRRKEAVSSYQALLVEIIKDPKASWTESKPKLEKDPQGRAVNPDLGKGDAEKLFRDHVKDLYERCVRDFRALLSEVVTPEVAARTTDEGKTAINSWTEAKGLLRSDPRYNKLASKDRESIWRRYADDMARKLKQSDTKEKSDTDGKQRRSSDPPRRR |
Length | 1067 |
Position | Unknown |
Organism | Leersia perrieri |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Leersia. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.814 |
Instability index | 57.47 |
Isoelectric point | 8.02 |
Molecular weight | 115308.70 |
Publications |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP03352 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 8| 444.31| 48| 49| 83| 130| 1 --------------------------------------------------------------------------- 6- 43 (35.47/ 6.62) ....P...DAAAP..AAEEPlQSEA......................SA.........D...PAAESE...GASDSGAVAAATP 45- 81 (52.15/12.81) AVD......GAADgdASTAP..APAS.SFSA..............TP...........P...PMP.......ANPVPPAT...P 83- 130 (97.18/29.53) PPRPP...FGAPP..AYGSP.QAPAF.SYNV..............LPRA.........P...PRPQAM...TAPSLPAAALQPP 132- 176 (50.84/12.33) PVQ.Y...FGNRP...........SF.SYNV..............VSQS.........NtglPTGQQFqldTGTNHAAQRFVPP 181- 211 (52.87/13.08) PPAPM...SLARP..SSAFP.GAGA.......................M.........P...PN............PPGSIRLP 215- 285 (47.76/11.18) PPRPSsntFVASP..QQAQP.QTSQL.PLNTgssdvstsqshtrsVPEAsqtmqlstgP...PSTSTT...GSPSI...AVQMP 291- 322 (37.24/ 7.28) PTRPE..vFGGVG..A.SVP.VQPS....TI..............LS........................TPPSLFG...RP. 362- 408 (70.80/19.73) VPSQP..lWGYPP..QPTGF.QQPPFqSYPP..............GPLG.........P...GRP.MF...GSSAVP..NIQPP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 6| 393.56| 61| 61| 737| 797| 2 --------------------------------------------------------------------------- 674- 739 (75.37/38.49) EEHGPSKEDCIRQFKEMLKErgV.............APFSKWEKELP....KLVFDPRFKA....IPSHSRRTIFDH....yvrtradEER 740- 805 (91.03/47.94) KEKKAAQRAAVEAYKQLLEE..V.............SEDINSNKDYQEFKRKWGTDPRFEA....LDRKEREALFNE......kvksiEEK 806- 870 (74.52/37.98) ..VQSLRNAVITEFKSMLRE................SKDITSTSRWTKVKENFRSDARYKA....MKHEEREDAFNE....yvaelksAEK 871- 906 (40.07/17.20) EAEQAA........KAKLDE..Q.............AK.......LKERER........ET....RKRKER.....E........eqeMER 907- 975 (63.40/31.27) VKLKIRRKEAVSSYQALLVE..I.............IKD..PKASWTESKPKLEKDPQGRAvnpdLGKGDAEKLFRD....hvkdlyeRC. 976- 1047 (49.16/22.68) ..........VRDFRALLSE..VvtpevaarttdegKTAINS...WTEAKGLLRSDPRYNK....LASKDRESIWRRyaddmarklkqSDT --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 97.28| 26| 49| 463| 488| 3 --------------------------------------------------------------------------- 463- 488 (48.80/30.69) WSAHKTEAGVVYYYNALTGESTYQKP 515- 540 (48.47/30.43) WSIVTTSDGKKYYYDNKQKVSSWQLP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 45.73| 13| 15| 416| 428| 4 --------------------------------------------------------------------------- 416- 428 (22.64/14.25) SKELSTTNSGSEQ 433- 445 (23.09/14.69) SAELSSTVHGSQN --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 117.20| 39| 49| 562| 601| 5 --------------------------------------------------------------------------- 562- 587 (36.02/17.12) ........................LQDAGTVGNKGEISIDINTP..AVQTGG 588- 635 (43.72/27.18) RDSLPLRQTVaPASpsaldlikkkLQDAGA....SSVPSPLATPssASELNG 639- 670 (37.45/18.44) TDAAPKGQQV.PIS.......gekSKDNSGDGNMSDSSSD............ --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) ALDLIKKKLQD 2) AVAAATPAAV 3) DGKKYYYD 4) MATAAPDAAAPAAEEPLQSE 5) SIWRRYADDMARKLKQ | 604 37 522 1 1029 | 614 46 529 20 1044 |
© 2021 Shailesh Lab
Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab