<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03332
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAGELGQQTVELGAVVRRAAEDSYLALRELVEKSRVEAEGKNNGQQRSDTEKKIDLLKFIDRTRQRMLRLHVLAKWCQQVPLVHYCQQLASTLSSHETCFTQTADSLFFMHEGLQQARAPIFDVPSAIEILHTGSYRRVPKCVEEIGTQNTLFQDEQKPTLKKLSTLVRAKLLETSLPKEISEVSVTDGIANVKVDGEFKVLITLGYRGHFSLWRILHMELLVGEKTGPIKFEETRRYALGDDIERRMAVADNPFMILYTILHELCISLVMDTVIRQTNALRQGRWKDAIKSELISDIHSGAGQGGNNALMQLGQDGELDSSGSRIPGLKISYWLEEKSALAESDSSPFIKIEAGQDMKIKCQHSSFVLDPFTDKEAGLLIDPSRIDVEALILKAIACNRHTRLLEIQRELIKNVQMSQSPTEVILKREVHGEGFQKKVRIGGSDDCCTNEMLQVRAYGQSYIQLGINIRNGRFLLQSPGNILPPSAVSDSEEALNKGSATATDVFVSLRTRSILHLFAATASSLGLKVYSQSQVTLKIPKSILYGSDFMVMGFPQCANAYYLLMQLDNSFKPAFCLLEIQSNEGDKNNADATTDAKDTIRFIRIDINKLKIDEDVQIANFFDKDKLLALQNAEDRPPRKSGTDEPLPSRPSFSSVVDEVFVCDRGSPTTESQGFPFSSHSSYQVGLHGVRGGAGSPDQDYGSLQSNINSANGTSGVSMNNYLQSNSKHVQSTIAFSGSVPAGSGNISSSHSDGPSRKRSLSEFLPNIPSLKQYKIGDGPSKRRKVSEFMLDGLPLRASPNMQPGKILTYGKLLEEVNNCITANIYSSVLLHVIKHCSICIKYAQLTAQMDSLNISYIEEVGVQTASSNLWLRLPFAHDASWKHICLRLGKAGSMSWDVRINDPHYGALWKLYGGSTTTGWGSGVRVANTSEVDSHISFDGDGILLTYDTVEADSIQRLVLDLQRLSNARAFSCGMRRLIGVKLDDKIVKTLTAAETKLHSRRKASRDRLSEQMRKTFRIEAVGLMSLWFSYGAVPMVYFVVEWETGKSGCTMRVSPDQLWPHTKFLEDFVNGDEVASFLDCIRLTAGPLLALCGAIRPAKMPVTVPSSYTALPKQNNILTTVGPANNSSSSTVPNMSVPQGAAVAHSNSHLQTSSMLSAAGRTTPGPPGLVPSSLLPFDVSVVLRGPYWIRIIYRKKFSVDLRCFAGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQGLNAFEPNLLNARHPGPQLNASFNTASGSQQSAPTTPNRFGGAPGVARPTSSVGNQVATSTSRAGNAMMASGFASGIPGAPAHLSPGNLGLGDDGSYGGGWVPLAALKKVLRGILKYLGVLWLFAQLPDLLKEILGSVLKDNEGALLNLDHEQPALRFFVGGYVFAVSVHRIQLLLQVLNVKRFHHQQQQQQQTPQSNGQEELTPSDISEICDYFSRRVASEPYDASRVASFITLLTLPTSVLREFIKLIAWKKSFTQAHGDNGTTQRARIELCLEKHPRLVSDDYTASSSSSKSNIHHDRANSSVEFALTFVLDQGLVPHMSISGGAAWLPYCVSVRLRYTFGDNSHIVFLAMDGSHSGRACWLQNEDWERCKQKVARAVETMNGSAAIGDMSQGRLRMVAEMVQKQLQLSLLQLRDGPLSNGSAAS |
Length | 1672 |
Position | Tail |
Organism | Leersia perrieri |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Leersia.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.222 |
Instability index | 48.93 |
Isoelectric point | 8.50 |
Molecular weight | 183482.97 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP03332
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 92.89| 17| 24| 753| 769| 1
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635- 651 (32.32/19.96) DRPPRKSGTDEP.LPSRP
753- 769 (33.65/21.14) DGPSRKRSLSEF.LPNIP
778- 795 (26.93/15.23) DGPSKRRKVSEFmLDGLP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.12| 15| 16| 1124| 1138| 2
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1124- 1138 (25.94/14.70) GPANNSSSSTVPNMS
1142- 1156 (23.18/12.25) GAAVAHSNSHLQTSS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.44| 14| 17| 922| 935| 3
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922- 935 (23.86/14.13) GSGVRVA.NTSEVDS
941- 955 (19.58/10.28) GDGILLTyDTVEADS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 60.46| 18| 23| 682| 703| 5
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684- 701 (31.61/24.46) QVGLHGVRGGAGSPDQDY
705- 722 (28.84/ 7.66) QSNINSANGTSGVSMNNY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 100.03| 28| 118| 1083| 1114| 7
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1083- 1114 (44.53/32.32) IRLTAGPLLALcgaiRPAKMPVTVPSSYTALP
1203- 1230 (55.49/30.16) LRCFAGDQVWL....QPATPPKGGPSVGGSLP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 73.03| 23| 24| 413| 435| 10
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413- 435 (39.10/24.22) KNVQMSQSP...TEVILKREVHGEGF
437- 462 (33.92/20.09) KKVRIGGSDdccTNEMLQVRAYGQSY
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 63.54| 18| 118| 888| 914| 11
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866- 883 (35.51/19.37) ASSNLW.LRLPFAH.DASWK
892- 911 (28.03/22.95) AGSMSWdVRINDPHyGALWK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 114.28| 35| 675| 557| 594| 12
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557- 594 (52.71/50.98) CANAYYLLM....QLDNSFKPAfcLLEIQsNEGDKNNADATT
1231- 1269 (61.57/44.49) CPQFRPFIMehvaQGLNAFEPN..LLNAR.HPGPQLNASFNT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 120.91| 37| 1021| 278| 317| 13
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278- 317 (54.24/44.90) TNALRQGrwKDAIKSELISDIhSGAGQGGNNALMQLGQDG
1303- 1339 (66.68/41.27) TSTSRAG..NAMMASGFASGI.PGAPAHLSPGNLGLGDDG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 95.34| 26| 1346| 218| 243| 16
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218- 243 (45.85/26.82) HMELLVGEKTGPIKFEETRRYALGDD
1565- 1590 (49.49/29.50) HMSISGGAAWLPYCVSVRLRYTFGDN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 124.72| 36| 59| 1440| 1475| 18
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1440- 1475 (62.37/44.08) QSNGQEELTPSDISEICDYFSRRVASEPYDASRVAS
1502- 1537 (62.36/44.08) QAHGDNGTTQRARIELCLEKHPRLVSDDYTASSSSS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 59.93| 19| 24| 983| 1001| 20
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983- 1001 (29.03/19.67) KLDDKIVKTLTAAETKLHS
1009- 1027 (30.91/21.43) RLSEQMRKTFRIEAVGLMS
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