<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03314

Description Uncharacterized protein
SequenceMWKLLDQAMASRLVSPLHTLALLTPRVVPNRRAQPEAYRLYLELIAQYTVAPVYSERAETKAMLINSIDDALHLSDSYGFQKMDFGHTVILFVLSIIKILTDCIMEDCGLPRIDYDGHDKLFSIGAEKNKNLDGMGSSLDRRDEHRECLRRKNIVMTLEVVEKITANKNTQVFLRLVYHNRPENFSSLLQRLQLMGALKSKNFVSANNLLDSLMLNIRNVITTGHQLYKGRLLGNIVSTKPCSSAARCVFGAGKSSCWIPFDMFMENAMDGRHLHTISAIEALIELSKTLQVLNRATWQETFQALWISALRLIQRDRGTLEGPFPHLHSRLCMLLAIVPLSIASILKEESDKLEGGMVSVRRGELLSSLQVLGQFFGLLSPPPAVVRSANSAARKALGALSILKDESENIHNSKDSSSNKAVKDTCAVEESPWSALMEGSPLMALKDALMVTPASSLAELEKLQPFAVSGSDEEKLAVSKILCGASLLHGWNIQEHVIQMVLKLLSTLLPLDSRSDGFYIHHMPMLHALISGISSIDAVHILSMYGLVPDLAAILMPLCEIFGSLPPSDHRRCSFEEASVYSVFSCAFLCLLRLWKFHTPPVEYALSKHGAFVRSELSLDFLLLLRNNRFAWKSPCDVIRSSILQLDPSFHKPVYIDSFPKLRAWYFQNQACIASTLSSAYKKKCILQVANMILKIICHKMSKGGIFPVSSQSTSNSSTSGSPLGVQEDLCQGPPATAWEVLEAVPFVLETVLTACAHGRLSSRDLITGLRDLVDFLPASLAVIVSYFSAEITRGIWKPVMLNGTDWPSPAAALLAIESEIKEVLASAGVHVNISPQSRPPIPMLPLPMATLISLSITVKMEELTHIQGIIGQGVEICATSSSWPSMPIIGALWAQKVRRWHDYIILACSETPFTSDKNAVAQLIRSCFSCFLGPLVDGRSCFVPERGVTSLLGQAYHERGPKLSVSPGLLYIRCCRMFPDNFVACEEIFKVVIERARALANECDSSRPYLLRSGRMTLSSVACSVEQIASLAAAMLCHAGGMKLIRLLYEQVLPTMLLSAGEAKLGSAGPVCSTFEGFALAYVVLVSGASIWGVGETSPVYTSVYTSKRQRVVDRHLDFLAKVMEGNIELGCGPVTWRTYVICFVSLLVDFVPTWIPEVKLETLQKLASGLWKWHERDLALSLLERGGPQAVTTVVEYIM
Length1201
PositionTail
OrganismLeersia perrieri
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Leersia.
Aromaticity0.07
Grand average of hydropathy0.188
Instability index52.98
Isoelectric point7.96
Molecular weight132525.17
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03314
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     276.96|      71|      74|     734|     807|       1
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  660-  733 (72.74/44.43)	P.KLRAW.......YFQNQ....ACIASTLSSaykKKCILQVANMI......LKIICH...............KMSKGG........IFPVSSQSTsnsstsgsplgvqedlcQG
  734-  807 (118.02/84.17)	P.PATAWEVLEA.VPFVLETvltACAHGRLSS...RDLITGLRDLVDFLPASLAVIVS...........YFSAEITRGI........WKPVMLNGT.................DW
  808-  894 (86.20/54.12)	PsPAAALLAIESeIKEVLAS...AGVHVNISP...QS.....RPPIPMLPLPMATLISlsitvkmeeltHIQGIIGQGVeicatsssWPSMPIIGA.................LW
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.83|      14|      78|     557|     571|       3
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  557-  571 (25.59/18.69)	PlCEIFGS....LPPSDHR
  635-  652 (23.24/11.80)	P.CDVIRSsilqLDPSFHK
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.30|      17|     576|     594|     610|       4
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  594-  610 (33.44/20.31)	LWKFHTPPVEYALSKHG
 1172- 1188 (31.87/19.01)	LWKWHERDLALSLLERG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.55|      14|      54|     340|     353|       5
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  340-  353 (22.40/13.25)	LSIASILKEESDKL
  397-  410 (23.14/13.92)	LGALSILKDESENI
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.92|      25|     245|     256|     284|       8
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  256-  284 (42.02/39.07)	SCWIPFDmfmeNAMDGRHLHTISAIEALI
  506-  530 (46.90/31.35)	STLLPLD....SRSDGFYIHHMPMLHALI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03314 with Med33 domain of Kingdom Viridiplantae
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