<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03305

Description Uncharacterized protein
SequenceMPPTYRIIKVARDEDFRSRIGEDGHYFDLVDFRRIEGFRLPDSLTISSLKAMIARKFGTPVQCQRLWRWTKRNNKTYRINRPLTAEEEDLSVLHPHSLQTETKTDHALVFLKLFDPEKAQLRYVGSLYVNGSSMPSEILPKLRSLAGFSASETIELYEEIKFDPSVMCEPIDIDLTFSASEIITGDIICYQKSPPQNWGIYSSVASFLQHVCDHKKKWKRRILEEEIASFKLQADTDRLKKEETMTDNAVRQVNELLDQSSYVFLDFSPEDLEQAADHFNHGRKVGDTEYGQTYKGMIHNNMVAIKLSSSQSLFLQEVSVLRQWRHPNIISFIGVCTEISVLVYEWVSNGNLEDRIVCTNDSPPLSWHIRTQIIGDICCALLFLHSNKPTALVHGDLRPCNILIDANYRSKLCNIGMSNLFVQPGSCPPNLMERLPYMDPEFNFTGEITALSDVYSLGVIILRLLTGMAPYNLSKKVAESLEGNSLPLLIDKSAGDWPYIEAKQLAVLGLSCVEMTRDKRPDLLNKVWKVVQPLMRKHPAASWPYIQSTSVESSAPAPFICPIRMEIMKDPQVASDGFTYEAEAIGSWFDRGNSSRSPMTNLPLPNLHLIPNRVLCSSIQEYIQQQQHNGWRAVVVTEEDFRSRIGKHGHYFDLIDFNRIDGFNVRASTIILNFKSTDRFNFSQWNLAAVFGTPVHCQRLWLWSRRQNKTYRVIRPLTIEEEKLSVLRSHSLPIWSNRDDALLFIKYYDQEHSYGQQFFEIQFEPSVMCEPIDIHKTFSAGDIGTGDIICYRKIKKPKDLPKKYISIEYFLHRVCGQEMYEEERKVHILEEEIVALKRQAETCLLQKEEALTACDQFKHERDNAVRQVNELRDQRTHVILNFSRKDLEQATQHFSNAGKVSILGQWRHPNIITFIGVCSETSALVYEWLPNGNLEDRIVRTNDSPPLSWHNRTRIIGEICCALLFLHSNKPIALVHGDLRPCNILIDANYRSKLCNIVMYNLFLQPGSSPPNLTERLPYMEEYVTTGELTTLSDVYSLGVIILRLLTGMPPLNLLKKVAESLKDDSLHLLIDKFAGDWPYIEAKQLAVLGLSCAEMTREKRPDLLNKVWKEIQPLMRKPPAASWSCIQSASTESSTPAPFVCPISMDIMKDPQVASDGFTYEAEAIKCWFDRGYSRSPMTNLPLPNLNLIPNRILCSSIQEYLEQQQ
Length1207
PositionTail
OrganismLeersia perrieri
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Leersia.
Aromaticity0.09
Grand average of hydropathy-0.296
Instability index54.70
Isoelectric point6.28
Molecular weight138340.08
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03305
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      98.51|      20|      22|     188|     209|       1
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  188-  207 (36.23/15.97)	ICYQK.SPPQN.WGIYSSVASF
  211-  230 (35.80/18.75)	VCDHK.KKWKR.RILEEEIASF
  789-  810 (26.48/ 8.88)	ICYRKiKKPKDlPKKYISIEYF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     140.99|      15|      44|     487|     501|       2
---------------------------------------------------------------------------
  487-  501 (31.53/18.70)	PLLIDKSAGDWPYIE
  533-  547 (33.48/20.33)	PLMRKHPAASWPYIQ
 1069- 1082 (24.45/12.78)	.LLIDKFAGDWPYIE
 1102- 1113 (20.36/ 9.36)	PDLLNKV...WKEIQ
 1114- 1128 (31.17/18.40)	PLMRKPPAASWSCIQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.02|       9|      48|     512|     522|       3
---------------------------------------------------------------------------
  512-  520 (19.14/16.72)	CVEMTRDKR
 1093- 1101 (18.89/ 6.82)	CAEMTREKR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     235.84|      48|     298|     270|     317|       4
---------------------------------------------------------------------------
  270-  317 (79.56/51.10)	EDLEQAADHFNHGRKVGDTEYGQTYK.GMIHN..NMVA.IKLSSSQSLFLQE
  324-  345 (21.50/ 8.33)	........................WR....HP..NIISfIGVCTEISVLVYE
  812-  848 (40.76/22.52)	...........H.RVCGQEMYEEERKvHILEE..EIVA.LKRQAETCLLQKE
  852-  882 (24.31/10.40)	....TACDQFKHERDNAVRQVNELRD.QRTHVilNF................
  885-  927 (69.72/43.85)	KDLEQATQHFSNAGKVS..ILGQ.WR....HP..NIITfIGVCSETSALVYE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     192.36|      43|     211|     366|     408|       5
---------------------------------------------------------------------------
  366-  408 (96.23/60.14)	SWHIRTQIIGDICCALLFLHSNKPTALVHGDLRPCNILIDANY
  948-  990 (96.14/60.08)	SWHNRTRIIGEICCALLFLHSNKPIALVHGDLRPCNILIDANY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     132.53|      16|     185|     409|     424|       6
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  409-  424 (31.86/18.66)	RSKLCNIGMSNLFVQP
  596-  611 (34.21/20.60)	RSPMTNLPLPNLHLIP
  991- 1006 (32.85/19.47)	RSKLCNIVMYNLFLQP
 1176- 1191 (33.61/20.10)	RSPMTNLPLPNLNLIP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     459.00|     132|     579|     346|     627|       7
---------------------------------------------------------------------------
  425-  627 (228.15/154.51)	GSCPPNLMERLPYMDpEFNFTGEITALSDVYSLGVIILRLLTGMAPYNLSKKVAESLEGNSLpllidksagdwpyieAKQLAVLGLScvemtrdkrpdllnkvwkvvqplmrkhpaaswpyiqSTSVESSAPAPFICPIRMEIMKDPQVASDGFTYEAEAIGSWFDRGnssrspmtnlplpnlhlipNRVLCSSIQEYIQQQQ
 1007- 1207 (230.85/132.47)	GSSPPNLTERLPYME.EYVTTGELTTLSDVYSLGVIILRLLTGMPPLNLLKKVAESLKDDSLhllidkfagdwpyieAKQLAVLGLScaemtrekrpdllnkvwkeiqplmrkppaaswsciqSASTESSTPAPFVCPISMDIMKDPQVASDGFTYEAEAIKCWFDRG.ysrspmtnlplpnlnlipNRILCSSIQEYLEQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     524.95|     143|     633|       5|     152|       8
---------------------------------------------------------------------------
    5-  152 (252.82/208.17)	YRIIkVARDEDFRSRIGEDGHYFDLVDFRRIEGFRLPDSLTISSLKAM.........IARKFGTPVQCQRLWRWTKRNNKTYRINRPLTAEEEDLSVLHPHSLQTETKTDHALVFLKLFDPEKAqlrYvGSLYVNGSSMPSEILPKLRSLAGFSASE
  631-  782 (272.12/205.79)	WRAV.VVTEEDFRSRIGKHGHYFDLIDFNRIDGFNVRASTIILNFKSTdrfnfsqwnLAAVFGTPVHCQRLWLWSRRQNKTYRVIRPLTIEEEKLSVLRSHSLPIWSNRDDALLFIKYYDQEHS...Y.GQQFFEIQFEPSVMCEPIDIHKTFSAGD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.59|      20|     579|     346|     365|       9
---------------------------------------------------------------------------
  346-  365 (44.41/29.21)	WVSNGNLEDRIVCTNDSPPL
  928-  947 (44.17/29.01)	WLPNGNLEDRIVRTNDSPPL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03305 with Med32 domain of Kingdom Viridiplantae
Unable to open file!