<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03304

Description Uncharacterized protein
SequenceMPPTYRIIKVARDEDFRSRIGEDGHYFDLVDFRRIEGFRLPDSLTISSLKSPDRFNFSQAMIARKFGTPVQCQRLWRWTKRNNKTYRINRPLTAEEEDLSVLHPHSLQTETKTDHALVFLKLFDPEKAQLRYVGSLYVNGSSMPSEILPKLRSLAGFSASETIELYEEIKFDPSVMCEPIDIDLTFSASEIITGDIICYQKSPPQNWGIYSSVASFLQHVCDHKKKWKRRILEEEIASFKLQADTDRLKKEETMTVNELLDQSSYVFLDFSPEDLEQAADHFNHGRKVGDTEYGQTYKGMIHNNMVAIKLSSSQSLFLQEVSVLRQWRHPNIISFIGVCTEISVLVYEWVSNGNLEDRIVCTNDSPPLSWHIRTQIIGDICCALLFLHSNKPTALVHGDLRPCNILIDANYRSKLCNIGMSNLFVQPGSCPPNLMERLPYMDPEFNFTGEITALSDVYSLGVIILRLLTGMAPYNLSKKVAESLEGNSLPLLIDKSAGDWPYIEAKQLAVLGLSCVEMTRDKRPDLLNKVWKVVQPLMRKHPAASWPYIQSTSVESSAPAPFICPIRMEIMKDPQVASDGFTYEAEAIGSWFDRGNSSRSPMTNLPLPNLHLIPNRVLCSSIQEYIQQQQHNGWRAVVVTEEDFRSRIGKHGHYFDLIDFNRIDGFNVRASTIILNFKSTDRFNFSQWNLAAVFGTPVHCQRLWLWSRRQNKTYRVIRPLTIEEEKLSVLRSHSLPIWSNRDDALLFIKYYDQEHSYGQQFFEIQFEPSVMCEPIDIHKTFSAGDIGTGDIICYRKIKKPKDLPKKYISIEYFLHRVCGQEMYEEERKVHILEEEIVALKRQAETCLLQKEEALTACDQFKHERDNAVRQVNELRDQRTHVILNFSRKDLEQATQHFSNAGKVSILGQWRHPNIITFIGVCSETSALVYEWLPNGNLEDRIVRTNDSPPLSWHNRTRIIGEICCALLFLHSNKPIALVHGDLRPCNILIDANYRSKLCNIVMYNLFLQPGSSPPNLTERLPYMEEYVTTGELTTLSDVYSLGVIILRLLTGMPPLNLLKKVAESLKDDSLHLLIDKFAGDWPYIEAKQLAVLGLSCAEMTREKRPDLLNKVWKEIQPLMRKPPAASWSCIQSASTESSTPAPFVCPISMDIMKDPQVASDGFTYEAEAIKCWFDRGYSRSPMTNLPLPNLNLIPNRILCSSIQEYLEQQQ
Length1210
PositionTail
OrganismLeersia perrieri
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Leersia.
Aromaticity0.09
Grand average of hydropathy-0.299
Instability index54.76
Isoelectric point6.28
Molecular weight138735.48
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03304
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     157.17|      26|      83|     405|     430|       1
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  405-  430 (53.97/30.27)	ILIDANY.RSKLCNIGMSNLFVQPGS..C
  599-  614 (22.21/ 8.38)	........RSPMTNLPLPNLHLIP.....
  987- 1011 (47.01/25.47)	ILIDANY.RSKLCNIVMYNLFLQPGS...
 1174- 1199 (33.97/16.49)	...DRGYsRSPMTNLPLPNLNLIPNRilC
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      98.51|      20|      22|     197|     218|       2
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  197-  216 (36.23/19.05)	ICYQK.SPPQN.WGIYSSVASF
  220-  239 (35.80/22.32)	VCDHK.KKWKR.RILEEEIASF
  792-  813 (26.48/10.67)	ICYRKiKKPKDlPKKYISIEYF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|    1230.08|     333|     579|     168|     630|       3
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  168-  630 (607.15/487.40)	EIKFDPSVMCEPIDIDLTFSASEIITGDI.....icyqksppqnwgiyssvasflqhvcdhkkkwkrrileeeiasfKLQADTDRLKKEETMT...............VNELLDQSSYVFLDFSPEDLEQAADHFNHGRkvgdteygqtyKgmihnnmvaiklsssqslflqeVSVLRQWRHPNIISFIGVCTEISVLVYEWVSNGNLEDRIVCTNDSPPLSWHIRTQIIGDICCALLFLHSNKPTALVHGDLRPCNilidanyrsklcnigmsnlfvqpgscPPNLMERLPYMDpEFNFTGEITALSDVYSLGVIILRLLTGMAPYNLSKKVAESLEGNSLPLLIDKSAGDWPYIEAKQLAVLGLSCVEMTRDKRPDLLNKVWKVVQPLMRKHPAASWPYIQSTSVESSAPAPFICPIRMEIMKDPQVASDGFTYEAEAIGSWFdrgnssrspmtnlplpnlhlipnrvlcSSIQEYIQQQQ
  763- 1210 (622.94/417.32)	EIQFEPSVMCEPIDIHKTFSAGDIGTGDIicyrkikkpkdlpkkyisieyflhrvcgqemyeeerkvhileeeivalKRQAETCLLQKEEALTacdqfkherdnavrqVNELRDQRTHVILNFSRKDLEQATQHFSNAG...........K......................VSILGQWRHPNIITFIGVCSETSALVYEWLPNGNLEDRIVRTNDSPPLSWHNRTRIIGEICCALLFLHSNKPIALVHGDLRPCNilidanyrsklcnivmynlflqpgssPPNLTERLPYME.EYVTTGELTTLSDVYSLGVIILRLLTGMPPLNLLKKVAESLKDDSLHLLIDKFAGDWPYIEAKQLAVLGLSCAEMTREKRPDLLNKVWKEIQPLMRKPPAASWSCIQSASTESSTPAPFVCPISMDIMKDPQVASDGFTYEAEAIKCWF.drgysrspmtnlplpnlnlipnrilcSSIQEYLEQQQ
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     480.92|     125|     626|       5|     134|       4
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    5-  134 (231.58/162.51)	YRIIkVARDEDFRSRIGEDGHYFDLVDFRRIEGFRLPDSLTISSLKSPDRFNFSQAMIARKFGTPVQCQRLWRWTKRNNKTYRINRPLTAEEEDLSVLHPHSLQTETKTDHALVFLKLFDPEKAqlrYvG
  634-  758 (249.34/159.46)	WRAV.VVTEEDFRSRIGKHGHYFDLIDFNRIDGFNVRASTIILNFKSTDRFNFSQWNLAAVFGTPVHCQRLWLWSRRQNKTYRVIRPLTIEEEKLSVLRSHSLPIWSNRDDALLFIKYYDQEHS...Y.G
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03304 with Med32 domain of Kingdom Viridiplantae
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