<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03303

Description Uncharacterized protein
SequenceMPPTYRIIKVARDEDFRSRIGEDGHYFDLVDFRRIEGFRLPDSLTISSLKSPDRFNFSQAMIARKFGTPVQCQRLWRWTKRNNKTYRINRPLTAEEEDLSVLHPHSLQTETKTDHALVFLKLFDPEKAQLRYVGSLYVNGSSMPSEILPKLRSLAGFSASETIELYEEIKFDPSVMCEPIDIDLTFSASEIITGDIICYQKSPPQNWGIYSSVASFLQHVCDHKKKWKRRILEEEIASFKLQADTDRLKKEETMTDNAVRQVNELLDQSSYVFLDFSPEDLEQAADHFNHGRKVGDTEYGQTYKGMIHNNMVAIKLSSSQSLFLQEVSVLRQWRHPNIISFIGVCTEISVLVYEWVSNGNLEDRIVCTNDSPPLSWHIRTQIIGDICCALLFLHSNKPTALVHGDLRPCNILIDANYRSKLCNIGMSNLFVQPGSCPPNLMERLPYMDPEFNFTGEITALSDVYSLGVIILRLLTGMAPYNLSKKVAESLEGNSLPLLIDKSAGDWPYIEAKQLAVLGLSCVEMTRDKRPDLLNKVWKVVQPLMRKHPAASWPYIQSTSVESSAPAPFICPIRMEIMKDPQVASDGFTYEAEAIGSWFDRGNSSRSPMTNLPLPNLHLIPNRVLCSSIQEYIQQQQHNGWRAVVVTEEDFRSRIGKHGHYFDLIDFNRIDGFNVRASTIILNFKSTDRFNFSQWNLAAVFGTPVHCQRLWLWSRRQNKTYRVIRPLTIEEEKLSVLRSHSLPIWSNRDDALLFIKYYDQEHSYGQQFFEIQFEPSVMCEPIDIHKTFSAGDIGTGDIICYRKIKKPKDLPKKYISIEYFLHRVCGQEMYEEERKVHILEEEIVALKRQAETCLLQKEEALTACDQFKHERDNAVRQVNELRDQRTHVILNFSRKDLEQATQHFSNAGKVSILGQWRHPNIITFIGVCSETSALVYEWLPNGNLEDRIVRTNDSPPLSWHNRTRIIGEICCALLFLHSNKPIALVHGDLRPCNILIDANYRSKLCNIVMYNLFLQPGSSPPNLTERLPYMEEYVTTGELTTLSDVYSLGVIILRLLTGMPPLNLLKKVAESLKDDSLHLLIDKFAGDWPYIEAKQLAVLGLSCAEMTREKRPDLLNKVWKEIQPLMRKPPAASWSCIQSASTESSTPAPFVCPISMDIMKDPQVASDGFTYEAEAIKCWFDRGYSRSPMTNLPLPNLNLIPNRILCSSIQEYLEQQQ
Length1216
PositionTail
OrganismLeersia perrieri
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Leersia.
Aromaticity0.09
Grand average of hydropathy-0.305
Instability index54.64
Isoelectric point6.28
Molecular weight139419.20
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03303
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     157.17|      26|      83|     411|     436|       1
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  411-  436 (53.97/30.45)	ILIDANY.RSKLCNIGMSNLFVQPGS..C
  605-  620 (22.21/ 8.37)	........RSPMTNLPLPNLHLIP.....
  993- 1017 (47.01/25.61)	ILIDANY.RSKLCNIVMYNLFLQPGS...
 1180- 1205 (33.97/16.55)	...DRGYsRSPMTNLPLPNLNLIPNRilC
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     121.31|      31|     389|     176|     212|       2
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  176-  206 (63.90/57.06)	MCEPIDIDLTFSASEIITGDIICYQK.SPPQN
  777-  808 (57.41/34.71)	MCEPIDIHKTFSAGDIGTGDIICYRKiKKPKD
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     140.99|      15|      44|     496|     510|       3
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  496-  510 (31.53/16.79)	PLLIDKSAGDWPYIE
  542-  556 (33.48/18.25)	PLMRKHPAASWPYIQ
 1078- 1091 (24.45/11.47)	.LLIDKFAGDWPYIE
 1111- 1122 (20.36/ 8.40)	PDLLNKV...WKEIQ
 1123- 1137 (31.17/16.52)	PLMRKPPAASWSCIQ
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|    1048.06|     298|     579|     210|     636|       4
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  210-  636 (516.07/454.63)	YSSVASFLQHVCD...HKKKWKRRILEEEIASFKLQADTDRLKKEETMT.........DNAVRQVNELLDQSSYVFLDFSPEDLEQAADHFnhgrkvgdteyGQTykGmihnnmvaiklsssqslflqEVSVLRQWRHPNIISFIGVCTEISVLVYEWVSNGNLEDRIVCTNDSPPLSWHIRTQIIGDICCALLFLHSNKPTALVHGDLRPCNilidanyrsklcnigmsnlfvqpgscPPNLMERLPYMDpEFNFTGEITALSDVYSLGVIILRLLTGMAPYNLSKKVAESLEGNSLpllidksagdwpyieAKQLAVLGLSCVEMTRDKRpdllnkvwkvvqplmrkhpaaswpyiqSTSVESSAPAPFICPIRMEIMKDPQVASDGFTYEAEAIGSWFdrgnssrspmtnlplpnlhlipnrvlcSSIQEYIQQQQ
  813- 1216 (531.99/362.82)	YISIEYFLHRVCGqemYEEERKVHILEEEIVALKRQAETCLLQKEEALTacdqfkherDNAVRQVNELRDQRTHVILNFSRKDLEQATQHF...........SNA..G....................KVSILGQWRHPNIITFIGVCSETSALVYEWLPNGNLEDRIVRTNDSPPLSWHNRTRIIGEICCALLFLHSNKPIALVHGDLRPCNilidanyrsklcnivmynlflqpgssPPNLTERLPYME.EYVTTGELTTLSDVYSLGVIILRLLTGMPPLNLLKKVAESLKDDSLhllidkfagdwpyieAKQLAVLGLSCAEMTREKRpdllnkvwkeiqplmrkppaaswsciqSASTESSTPAPFVCPISMDIMKDPQVASDGFTYEAEAIKCWF.drgysrspmtnlplpnlnlipnrilcSSIQEYLEQQQ
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      97.67|      26|      89|      26|      52|       5
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   26-   51 (48.58/33.56)	YFDLVDFRRIEGFRLPDSLTISSLKS
  660-  685 (49.09/28.36)	YFDLIDFNRIDGFNVRASTIILNFKS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     384.16|     111|     632|       5|     175|       6
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    5-  175 (175.01/165.24)	YRIIkVARDEDFRSRIGEDGHyfdlvdfrriegfrlpdsltisslksPDRFNFSQAMIARKFGTPVQCQRLWRWTKRNNKTYRINRPLTAEEEDLSVLHPHSLQTETKTDHALVFLKLFDPEKAqlrYvGSLYVngssmpseilpklrslagfsasetielyeEIKFDPSV
  640-  776 (209.16/128.55)	WRAV.VVTEEDFRSRIGKHGHyfdlidfnridgfnvrastiilnfksTDRFNFSQWNLAAVFGTPVHCQRLWLWSRRQNKTYRVIRPLTIEEEKLSVLRSHSLPIWSNRDDALLFIKYYDQEHS...Y.GQQFF.............................EIQFEPSV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03303 with Med32 domain of Kingdom Viridiplantae
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