<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03297

Description Uncharacterized protein
SequenceMASKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDASVQSDAKLWPFKVLAGPGDKPMIGVQYKGEEKQFSAEEISSMVLNKMKETAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKSSSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILTGEGNEKVQDLLLLDVTPLSQGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKAEDEEHKKKVDAKNSLENYAYNMRNTIKDDKIASKLPADDKKKIEDAIDGAISWLDSNQLAEAEEFEDKMKELEGVCNPIIAKMYQGAGADMAGGMDEDAPSAAGGSSGPGPKIEEVD
Length650
PositionUnknown
OrganismLeersia perrieri
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Leersia.
Aromaticity0.06
Grand average of hydropathy-0.444
Instability index34.81
Isoelectric point5.09
Molecular weight71059.49
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03297
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     216.26|      71|     279|     188|     333|       1
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  102-  175 (110.01/42.56)	GDKPMIGVQYKGEEKQFSAEEISSMVLNkMKETA.EAYLGST.IKNAVVtvPAYFNDSQRQATKD.AGVISGLNVMR
  197-  270 (106.24/164.49)	GEKNVLIFDLGGGTFDVSLLTIEEGIFE.VKATAgDTHLGGEdFDNRMV..NHFVQEFKRKNKKDiTGNPRALRRLR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      75.92|      18|      21|      38|      55|       2
---------------------------------------------------------------------------
   16-   33 (19.08/12.06)	....TTYSCVGVWQHDRveIIA
   38-   55 (32.55/26.43)	NR..TTPSYVAFTDSER..LIG
   60-   78 (24.29/17.63)	NQvaMNPINTVF.DAKR..LIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     113.99|      38|      41|     316|     356|       3
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  316-  356 (56.52/52.61)	FrKCMEPVEKCLRDAKMD.KSTVHDVVLVGGSTriPRVQQLL
  360-  398 (57.47/41.04)	F.NGKELCKSINPDEAVAyGAAVQAAILTGEGN..EKVQDLL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03297 with Med37 domain of Kingdom Viridiplantae
Unable to open file!