<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03290

Description Uncharacterized protein
SequenceMYLSAFSSSSASAHGGGGGEHEAARDSSTVVAVDRDKNSQQAAKWAVDKLLARGSVLQLVHVRPQQNVEAGRGGKDEADAEMQQMFISYRGYCARKGMQLKEVILDGNDISKAIVDYATSNAITDIVVGASTRNTFIRKFRNPDVPTCLMKMVPDYCTVHVIHKGKTIQVKAAKAPAPFTTLPPKQYSQSSIDSDGYARSRGDWKKISNQSSPKANRPSVDRLPGIAKAPTRERPLSGARTAPQKDFDDYIDFIAPPRPSVTRSSFSEDVDFPMSMELQSMDLVDSMELSTSMMSMESLSSAGKDVETEMRRLRLELKQTMEMYNSACKEAIDAKQKAAQMHQMKVEESKKYQELRNAEEEALALVQMEKAKCRAALEAAEAAQRIAELEAQKRLRAEWKAKREAEERRRATEAMNNTDLRYRRYSIDDIEAATHKFDKALKIGEGGYGPVYKAVMDHTNVAIKILRPDASQGRRQFQQEIEVLSCMRHPNMVLLLGACPEYGCLVYEYMDYGSLEDRLCRRGNTFPIPWNIRFRIAADIATGLLFLHQAKPEPLVHRDLKPANILLDHNFVSKISDVGLARLVPQSAAAAADATQYRMTSTAGTFCYIDPEYQQTGMLTTKSDIYSLGILLLQIITARSPMGLTHHVESAIERGRFQEVLDPTVTDWPVEEAMEFAKLAIRCAELRKKDRPDLGGEILPELNRLRCLGQEYDASKVSSSSTNCSSSAPYSYGNDDVSIS
Length740
PositionTail
OrganismLeersia perrieri
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Leersia.
Aromaticity0.06
Grand average of hydropathy-0.477
Instability index49.88
Isoelectric point7.20
Molecular weight82423.80
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03290
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.25|      23|      38|     264|     286|       1
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  264-  286 (41.85/30.25)	SSFSEDVDFPM...SMEL.QSMDLVDS
  300-  326 (31.40/20.84)	SSAGKDVETEMrrlRLELkQTMEMYNS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     136.51|      43|     355|     112|     170|       2
---------------------------------------------------------------------------
  112-  156 (68.31/59.68)	KAIVDYaTSNAITDIVVGAST.RNTFIRK......FRNPDVpTCLMKMVPDY
  453-  502 (68.21/35.38)	KAVMDH.TNVAIKILRPDASQgRRQFQQEievlscMRHPNM.VLLLGACPEY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.02|      23|     194|     170|     205|       4
---------------------------------------------------------------------------
  170-  193 (37.86/48.41)	VKAAKAPA...PFT...TLPPKQYsQSSID
  224-  252 (33.16/12.02)	PGIAKAPTrerPLSgarTAPQKDF.DDYID
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     125.60|      41|      45|     328|     369|       5
---------------------------------------------------------------------------
  328-  369 (63.59/43.93)	CK...EAIDAKQKAAQMHQMKvEESKKYQELRNAEEEALALVQME
  373-  416 (62.01/38.45)	CRaalEAAEAAQRIAELEAQK.RLRAEWKAKREAEERRRATEAMN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03290 with Med32 domain of Kingdom Viridiplantae
Unable to open file!