<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03200
Description |
Uncharacterized protein |
Sequence | MEEAVRVDLDKLPIKRLHAIDEAGNEHYPPDTSSEEQRLSAIRRIDFSWVIDKDAKKPKKDTAQQQQQQAWPWQGMMESLQQAQQELSVVIDLISTVEANDAVAVAGMLKPKSLPTETLVDTAVSAATKLQRVRHLSRYFKQSAKTMEQQFQKESRFYGSLIRHLLFQYHFTQVCTMNYSRIGGRLQQNWKVKRQRFGGSGPGSEGFMFDLIDTSQLDTAAMPRLSSLSLIPIDQDSSGTLSVQVPQKSCRFLSLNFRGDSANGVENYGHKLKDGISCITSSETDNDDVNKSIKHAHSILRNIHKSIFEEQVFDMVIRETFVQSQGINVTGMREDFLQLAIGQECSLCLSLAHSGDGSDSEMVDHEDHANSEDASNLVLVTMNGKLDPLRKDVTGFPNPRSLEIYLLQLFHENILRKVREKSLNIGRYQSPAQVAGDDYGLLGHFCLTVAHRIFSNKVLVELESVVSRVPYLHLRSLPTWHSRTSSWSLCLKVPQPILAADRIAKPSDNHELKYKSRSQFNTKVIVKDSQISLMGEGSPSIAGSLTGKPSDGYLVNSYNCDLEDLPTMLLQQVASQVIHWLHEEALVLGMNVTRDFLCLYFDLEQGETLGLVANVDPDDTCGCISWYLTIDHPTEDGKMSADSQEFEKRRFLGYVSLEVLYSTLMDLINLCNAGAHH |
Length | 677 |
Position | Head |
Organism | Oryza barthii |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.353 |
Instability index | 45.93 |
Isoelectric point | 5.76 |
Molecular weight | 76071.29 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:EnsemblPlants
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GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
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GO - Biological Process | production of miRNAs involved in gene silencing by miRNA GO:0035196 IEA:EnsemblPlants
regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP03200
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 56.11| 16| 17| 125| 140| 1
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125- 140 (27.48/19.84) SAATKLQRVRHLSRYF
143- 158 (28.63/20.99) SAKTMEQQFQKESRFY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 80.22| 24| 247| 223| 247| 2
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223- 247 (38.43/29.42) PRLSSLSLiPI..DQDSSGTLSVQVPQ
470- 495 (41.79/27.19) PYLHLRSL.PTwhSRTSSWSLCLKVPQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 254.21| 87| 95| 259| 353| 3
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259- 353 (123.73/114.29) GDSANG..VENYGHKLKDGISCITSSeTDN...DDVNKSIKhAHSILRNIHksIFEEQVF.DMVIREtfVQSQGINVtGMREDFLQLAiGQECSL....CLSLAH
355- 451 (130.49/88.43) GDGSDSemVDHEDHANSEDASNLVLV.TMNgklDPLRKDVT.GFPNPRSLE..IYLLQLFhENILRK..VREKSLNI.GRYQSPAQVA.GDDYGLlghfCLTVAH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 47.15| 13| 41| 496| 508| 4
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496- 508 (23.20/14.53) PILAADRIAKPSD
539- 551 (23.94/15.21) PSIAGSLTGKPSD
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