<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03184

Description Uncharacterized protein
SequenceMGSRGGDADAWETASARSGVSSSSSGRATAAAAAPAPENKVFVALPAQHKSGRSTLAWALRHVADLAPAAIGGGGEVVVVVAHVHSPAQMIPMSSTSLPGPESPNAAPPASPGTAARGVATAARSGDGEHLRAHNYPEDVAGLVGGKFHASKLRPEQVSTYRKYEREQVEKNLDEYLEQCTKMKVKFEKIVIENEDIANGITELILLHGVSKLVMGAAADKQYSRKMKLPKSKTALSVMVKANPSCKIWFVCKEHLIYTRDFVAPISANSQSPDTIRGSISNLAARGGTTNQYANNAVNGYVQRSMSEMVVPASSRVSLQLHSRSSLQESLSRLNMEGTSVDSWDRGSFPSSYRASSTVTEEVLSDSSSSGIPRDGISTLAGCDFPNSALHHEQGDAGSNANLFDKLEEAFAEAEKYRKQAYDESLRRQKTEEELISYHQKARKSEDLFLNEAKQRKEVEETLAKANVEIQLLMEEMDALKHNRDDLSSKLSEVSEQKVTLEQQAVEYGSIIIDLKDTVAASQALIDSMQMEFEQLKHERDNALKHAEELHREKQNMVSSSDLEWSTEFSLLELQQATQNFIDAMKIGEGGFGCVYRGQLRNTTVAIKMLRSQNLQGQSQFQQEVAVLSRVRHPNLVTLVGYCSEASGLVYEFLPNGSLEDHLACENNTSPLTWQIRTRIIGEICSALIFLHSDKPHAVIHGDLKPANILLDANLVSKLGDFGISRLLNRSSTVSTSFYQTTNPRGTFAYMDPEFLTTGELTARSDIYSFGIIILRLVTGKPALGIAREVEVALDKGELELLVDRSAGDWPFVQAEKLMLLGLQCAELSRRKRPDRMNHVWSVVEPLVKSASLPVEPESIGHWVNKNRTPFYFICPISQEVMRDPHIAADGFSYEEEAIKGWLGSGHNTSPMTKSTLEHLQLIPNLALRSAIEEFMQQKQQQIPS
Length945
PositionTail
OrganismOryza barthii
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.06
Grand average of hydropathy-0.365
Instability index48.41
Isoelectric point5.89
Molecular weight103892.04
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03184
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     201.52|      55|      55|     476|     530|       1
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  413-  473 (65.48/45.30)	EAEKYRKQAYD...............ESLRRQKTEEELISYH.QKARKSEDLFLneakqrkEVEETLAKANVEIQLL.
  476-  530 (86.26/62.18)	EMDALKHNRDD...............LSSKLSEVSEQKVTLE.QQAVEYGSIII.......DLKDTVAASQALIDSMQ
  532-  586 (49.78/32.55)	EFEQLKHERDNalkhaeelhrekqnmVSSSDLEWSTEFSLLElQQA.......................TQNFIDAMK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     155.19|      50|      50|     261|     310|       2
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  261-  298 (52.56/28.69)	..............DFVAPIS.ANSQSPDTIRGSISNLAARGGTTNQYANNAV
  299-  349 (76.01/44.70)	NGY.VQRSMSEMVvPASSRVS.LQLHSRSSLQESLSRLNMEGTSVDSWDRGSF
  351-  381 (26.62/10.98)	SSYrASSTVTEEV........lSDSSSSGIPRDGISTLA..............
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     127.78|      44|     605|     203|     257|       4
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  143-  191 (63.40/39.39)	LVGGkfhASKL.....RPEQVStyRKYEREQVEKNLDEYLEQCTKMKVKF...EKIV
  206-  257 (64.38/59.74)	LLHG...VSKLvmgaaADKQYS..RKMKLPKSKTALSVMVKANPSCKIWFvckEHLI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03184 with Med32 domain of Kingdom Viridiplantae
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