<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03166
Description |
Uncharacterized protein |
Sequence | MDGGGGGNWRPTQGSEARNRIVNKIMDTLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATSQSDYLRKISLKMLSMETKTQQNPGNAQVIQNQNPPGSVPGLPQGSNPTQSSAIPLMSQQQARQPNSTSVQSSLTNLGQNLPGVNQTSTLQNMSGMPQNTMNNGLAQGASQDIYATQRQMAGRQQQQQQSQNQLIYQQQQIMMKQKLQQNSLMQQQSLLQPTQMQSSQQPMMQIPSSLQPGQSIPQTQPMVQSSSQGGIQQNALNSVPQSVQSLLQQPTQSAMRQQQHSQSSMHPQPSLQQAQPTQQPNIPLQHQLMGQQQNLQQNQLIGQQNGAVDMPQQQRLPVQSNNLLNMQQTQQMLNQQSMPSHQQQQLGSQANISTLQQQQQQNQQQQQLLGTVPNVPNIQRMHMLQTKAVQQPQQQQHAQQSSLGLMQPQSQHNQLQQSQQHLMSQFQAQPNQLQQQLGMPQQPPMQQRLQTSAGMLLQQNNIDQQKQFMQAQRGLQEVSSSTSVDSTAQTGHTGTGTGDWQEEAYQMVKNLKDQYFPELNDLYNKISLKLQHVDNMVPPQKPTEQYEKMKSFKLMLERTMHVLQLNKGNIQPALRDKIPAYERQIISILNSQKRPRVQGQQTQFQQSAGQGPTSNIPQQQQPSQGLQQHDNHTNQMPQASMPSMSTGLQSSGAAGIQHLPASPATNFGVPATQQNVTNAPQATSNLEVTQGSNFNSLQHGSMSGALQQGSTGPMQGTLNAQQQASSSMLSHNSVGTMQANANSMQANANSLQQLKQQQQEHHMMQSQQMKRQMFQQFQQKQMLQQQLPAQQQLQKQQQSQMQVPQHHSGNDANELKVRQGAAMKPGIYQQHLAQRNNFYNQQIKQGSAFPISSPQNLQASSPQISHHSPQVDQHNLLPSQVKTGTPLQSANSPYMPSPSPPVAPSPIPVDSEKPLSNLSSSLTNTGQATHQQTNMAPQSQSIAVNTPGISASPLLAEFTSVDGNQANMPTQVLTKSSAAERPLDRLLKALRTTQRQSLSAAVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFITHDGTGTSKKMKRDTSAMPLNVSSAGSVNDSLKQTFSIGTPELQSTATSRVKWQKTEINHALMEEIHEINQQLIDTELHVCEDDAESFGATSEGTEGTVIKCTFTAVAVSPSLKSMFASAQMSPILPLRVLVPASYPKCSPVLLDKFPDEQRNSDDLSTKARSKFSILLRGLAEPMSLREIARTWDACARKVIAEYAQQTGGGSFSSSYGCWENCVGA |
Length | 1292 |
Position | Tail |
Organism | Oryza barthii |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.781 |
Instability index | 72.67 |
Isoelectric point | 9.37 |
Molecular weight | 142042.48 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
|
GO - Biological Function | chromatin DNA binding GO:0031490 IEA:InterPro
transcription coactivator activity GO:0003713 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP03166
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
6| 1138.29| 175| 177| 151| 325| 1
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10- 125 (118.85/18.13) .............................................RPTQGSEARNR....IV...N.KIM.dtLKKHL.PV....S..........................VPEGLNELQK.....IAvrfEE.KIYTAATSQSDyLRKISLKMLSMETKT.QQN..PGN.AQVIQN.....QNPPGSV...PG...LP.....QgSNPT...QSSAIP....LMSQQQA....RQP
151- 325 (321.19/61.54) QNMSGMPQNTMNNGLAQGASQD.IYATQRQM............AGRQQQQQQSQNQ....LIYQQQ.QIM...MKQKLQQN....S..LMQQQSL.LQPTQMQSSQQPMMQ.IPSSLQPGQS.....IP...QT.QPMVQSSSQGG.IQQNALNSVPQSVQSLLQQ..PTQ.SAMRQQ.....QHSQSSMHPQPS...LQ.....Q.AQPT...QQPNIPLQHQLMGQQQN....LQQ
326- 428 (127.11/19.90) ......................................................NQ....LIGQQNgAVD...MPQ..QQR....L..PVQSNNL.L...NMQQTQQMLNQ.........QS.....MP...SH.Q.............QQQLGS..QANISTLQQ..QQQ.QN.QQQ.....QQLLGTVPNVPN...IQrmhmlQ.TKAV...QQP....QQ.....QQH....AQQ
429- 586 (208.35/37.33) SSLGLMQPQSQHNQLQQ..SQ......QHLM............SQFQAQPNQLQQQ....LGMPQQ.P.P...MQQRLQTS....AgmLLQQNNI.DQQKQFMQAQRGLQE.VSSS....TS.....VD...STaQTGHTGTGTGD.WQEEAY....QMVKNLKDQyfPEL.NDLYNKislklQHVDNMVPPQ...............KPT...EQYEKMKSFKLM.........LER
592- 759 (178.69/30.97) Q.........LNKGNIQPALRDkIPAYERQIisilnsqkrprvQGQQTQFQQSAGQgptsNIPQQQ.Q.....PSQGLQQHdnhtN..QMPQASMpSMSTGLQSSGAAGIQhLPASPATNFG.....VP...AT.Q.............QNVTNA.PQATSNL..E..VTQgSNFNSL.....QH..GSM..SGA...LQ.....Q.GSTG........PMQGTLNAQQQAsssmLSH
763- 908 (184.09/32.13) GTMQANA.NSMQ.............ANANSL...............QQLKQQQQEH....HMMQSQ.Q.MkrqMFQQFQQK....Q..MLQQQ.L.PAQQQLQKQQQSQMQ.VPQH.HSGNDanelkVR...QG.AAM.....KPG.IYQQHLA...........Q....R.NNFYNQ.....QIKQGSAFPISSpqnLQ.....A.SSPQishHSPQVD.QHNLLPSQ.........
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 96.14| 23| 65| 931| 953| 2
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931- 953 (38.03/21.57) APSPIPV.....DSEKP.......LSNLSSSLTNT
964- 993 (28.32/14.04) APQSQSI.....AVNTPgisasplLAEFTSVDGNQ
994- 1021 (29.79/15.18) ANMPTQVltkssAAERP.......LDRLLKALRTT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 42.21| 12| 79| 1099| 1110| 5
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1099- 1110 (21.53/13.57) AGSVNDSLKQTF
1180- 1191 (20.68/12.73) AVAVSPSLKSMF
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