<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03143

Description Uncharacterized protein
SequenceMEAEDDEREAEARREKEAGNAAYRKLYLETAVRHYTRGALLDPRDISFLTNRAAAYLLMSKYKECVRDCDEAVEKGRELRADNKLVARALARKASALLKLAACAADYDPAIRALQQSLAEHYSEETLAKLGEAEEARKEIEERERLDQEAADHHRDRGNDFFEQKRYQEAAMHYTEAMKKNPKDPRVFSNRAQCHIYLGALSEGLEDADKCIELDPTFLKGYLRKAKVQLLMGNYEIALATYVEGLKCDPNNLEVLDGLRRCAACIKRANGGDARAEDLREILGDLHLNDDLCNKLQKSMDEAAVLKKEASNERLKRIESERLARTLEDLYLSQVQQRKETEESLSRVQQEFEQLKIQQDVVTVELQKVNEQNENLLGQLSDSREHFEWLLSEHDQLLRERDNAVREVEELRQKRGQMLSVLVTAMHCEFSSSEVESATENFSNSLKIGEGGFGCVYKGILRNMTVAIKVLRPDNLQGQSQFEQEVSILSRVRHPHLVTLLGACSESSTLVYEFLPNGSLEDFLMCSDKRQTLTWQARKNKPHPVVHGDLKPANILLGVNLVSKLSDFGISRLLIQSSTNNTTLYRTMHPVGTPLYMDPEFLSTGELTPQSDVYSFGIVVLRLLTGKPPVGIKKIMEDAMEKGDLNSVIDTSVGEWPHLLIEQLAYLALRCTELSRRCRPDLSGEVWAIVEAIRDAALSSPSSSRSAQDQNSPPSYFICPISQDIMDDPHIAADGFTYEAEAIRSWLCNGHDTSPMTNLRLEHEELVPNRALRSAIQEWLQQHSMSL
Length787
PositionTail
OrganismOryza barthii
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.06
Grand average of hydropathy-0.514
Instability index49.11
Isoelectric point5.33
Molecular weight89111.77
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03143
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     123.03|      22|      37|      52|      73|       1
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   52-   73 (37.41/21.30)	RAAA.YLLMSKYKECVRDCDEAV
   92-  111 (32.76/17.84)	RKAS.ALL..KLAACAADYDPAI
  191-  212 (34.50/19.13)	RAQC.HIYLGALSEGLEDADKCI
  224-  242 (18.36/ 7.10)	RKAKvQLLMGNYEIALATY....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     159.13|      49|     137|       2|      51|       2
---------------------------------------------------------------------------
    2-   51 (78.89/56.31)	EAEDDER..EAEARREKEAGNAAY.RKLYLETAVrHYTRGALLDPRDISFLTN
  139-  190 (80.24/52.61)	EIEERERldQEAADHHRDRGNDFFeQKRYQEAAM.HYTEAMKKNPKDPRVFSN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     117.49|      32|      32|     329|     360|       3
---------------------------------------------------------------------------
  305-  326 (22.13/ 9.57)	......VLKKEAS.NERLKRIESE....RLART
  329-  360 (49.65/30.28)	DLYLSQVQQRKET.EESLSRVQQEFEQLKIQQD
  363-  395 (45.71/27.32)	TVELQKVNEQNENlLGQLSDSREHFEWLLSEHD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03143 with Med32 domain of Kingdom Viridiplantae
Unable to open file!