<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03133
Description |
Uncharacterized protein |
Sequence | MIKPRVNWSDHANAVQSSCIKDEFLSSSFLFSLPTQRPNQEADCTGMLPLRIQGLERLQAPSIEKAWRSLRNTQVARKNYLRPGLSGKVKDCDSDHAHTYGTSSSYNVNKMDSVSRNRNPTQESMHQTTESGTMEKNSSHLPAGTKSCTRTYLNNYVVQADTITTTNQSLARTGPELFKTAPFIDNMCDDAKLDAMDEDELLASIDVDRIVMEHYQATNTPRGSSKSPLEKCNFNGFDENNLPQELSIMCDHGSKLAFCPEAKSHLLEMKDNLLAISHELIDGQLSPQQSDDLHQKRALLKKQIELLGEYTARLTQDEERQQSHSMASTTAHQGHHPTSILSSSFVKDTNIFQSPIYTRNEPGESGLCFSSAPYSYMDGLSMPLPSVQRDYTPRAIDISYTEGSGDKQWSSTHFAWTKELEANNKRVFGNRSFRPNQREIINATMSGNDLPALICNGVTLVVSPLVSLIQDQIMHLLQANISAAYLSASMEWSEQQEILRELMSPTCTYKLLYVTPEKIAKSDALLRQLENLYSRGHLSRIVIDEAHCVSQWGHDFRPDYQHLGILKQKFPQTPVLALTATATASVKEDVVQVLGLANCIIFRQSFNRPNLRYFVWPKTKKCLEDIHNFIHANHNKECGIIYCLSRMDCEKVAAKLREYGHKASHYHGSMDPEDRANIQKQWSKDRINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDSQLSSCVLFYNYSDYIRLKHMVTQGFAEQGTSAPRGGSSQEQALETHKENLLRMVSYCENDVDCRRLLQLIHFGEMFNPSCCAKTCDNCLKELRWVEKDVTNIARQLVDLVMMTKQTYSTTHILEVYRGSVNQNVKKHRHDTLSLHGAGKHLAKGEAARILRHLVIEEILIEDVKKSENYGSVSSVLKTNHKKSGDLLSGKHNVVLKFPTPEKAPKMGVLDESSVPRINKTNQQSQVDGSLAAELYEALQCLRTQIMDENPQLLAYHIFKNETLKEISNRMPRTKEELVEINGIGKNKLNKYGDRVLATIEDFLARYPNATRKTSSGGSNEHSEAVKKRRGFSVTNTSTNCDDFEERTVQSKKRAAKTRTRQEISDAASIVQDVRYIDLELDGCEQVNEVPYSVQKPVASGRVLPAWQSARIA |
Length | 1153 |
Position | Unknown |
Organism | Oryza barthii |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.557 |
Instability index | 49.70 |
Isoelectric point | 7.71 |
Molecular weight | 130020.63 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | 3'-5' DNA helicase activity GO:0043138 IEA:InterPro
ATP binding GO:0005524 IEA:UniProtKB-KW
hydrolase activity GO:0016787 IEA:UniProtKB-KW
nucleic acid binding GO:0003676 IEA:InterPro
|
GO - Biological Process | DNA recombination GO:0006310 IEA:InterPro
DNA repair GO:0006281 IEA:InterPro
DNA replication GO:0006260 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP03133
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 97.87| 29| 84| 9| 46| 3
---------------------------------------------------------------------------
9- 37 (51.55/41.07) SDHANAV.QSSCIKDEFLSSSFLFSLPTQR
94- 123 (46.32/19.94) SDHAHTYgTSSSYNVNKMDSVSRNRNPTQE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 364.40| 101| 142| 596| 698| 6
---------------------------------------------------------------------------
509- 555 (37.24/18.24) ........................................................YKLLYVTPEKIAksdALLRQLENLYSRGHLSRIVIDEAHCVS..QW.GHD.............
596- 698 (175.85/128.04) LANCIIFRQSFNRPNLRYFV..........WPKTKKCLEDIHNfIHaNHNKECGIIYCLSRMDCEKVA...AKLREYGHKASHYHGSMDPEDRANIQK..QW.SKDRINIICATVAFGM
733- 842 (151.30/101.17) LSSCVLFYNYSDYIRLKHMVtqgfaeqgtsAPRGGSSQEQALE.TH.KENLLRMVSYCENDVDCRRL....LQLIHFGE...MFNPSCCAKTCDNCLKelRWvEKDVTNIARQLVDLVM
---------------------------------------------------------------------------
|