<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03078

Description Uncharacterized protein
SequenceMAGRRVKGKDSKAITAVAIDKDKNSQHALKWALDHIVGDSPNCILLHVQTKLRIGEGENTEAPHDNQEEAHKFFLPFRGFCAKKGIRATELLLHDIDIGNAIVDYINKNSIANIVIGASARNTFLKKFKSVDVPTTLLKTTPDTCSVYIVSKDKLLTSRQASRPQTPQHNPQPSKQQSLLSILSDPGPTSFTSTESGRSSSALPPTRHYKPCLNMSSPGELSNELSSNRHSVESNASFYSILGRSTYGGSSHSSTSMYDITDGDEEGLSGGNITEQENQNLELEVRRLRLELQHFNATMGRDTAPHHQAAPESEKLEETKVAREMLRELSEMDKQKTQSAIHANEAAQRLAEIEKQKRRLVEMQAKFNEQNMSNTVSYRRYSIKDVEDATDGFSDALKIGEGGYGPVFKAVLENTSVAIKILKSDVSQGLKQFQQEVEVLSCMRHPNMVILLGACPEYGCLVYEYMENGTLEDRLFCKDDTPPLSWKARFRIAAEIATGLLFLHQAKPEPLVHRDLKPANILLDGHMISKISDVGLARLVPPAVADSFTHYHMTAAAGTFCYIDPEYQQTGMLGVKSDLYSFGVVLLQILTAMPAMGLSHRVEQGIEKNRLREVLDPRISDWPEEETLVLAQLALQCCELRKKDRPDLATVLLPALSKLREFATEDHEVHSSGRTSSVSRAHNSVPRSPISSSSQVGFLEPEVTDL
Length706
PositionTail
OrganismBrassica oleracea var. oleracea
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.06
Grand average of hydropathy-0.432
Instability index51.25
Isoelectric point6.20
Molecular weight78270.76
Publications
PubMed=24916971

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03078
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     117.08|      35|     442|     226|     262|       2
---------------------------------------------------------------------------
  226-  262 (56.85/42.05)	SSNRHSVESNAsfYSILGRSTYGGSSHSSTSMYDITD
  671-  705 (60.23/38.00)	SSGRTSSVSRA..HNSVPRSPISSSSQVGFLEPEVTD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     107.97|      31|     312|     137|     167|       3
---------------------------------------------------------------------------
  137-  167 (53.73/40.82)	LLKTTPD.TCSVYIVSKDKLLTSRQASRPQTP
  451-  482 (54.23/41.28)	LLGACPEyGCLVYEYMENGTLEDRLFCKDDTP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03078 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GSSHSSTSMYDITDGDEEGLSGGNITEQENQNLELEVRRL
2) LQHFNATMGRDTAPHHQAAPESEKLEETKVAREMLRELSEMDKQKTQSAIHANEAAQR
3) TSRQASRPQTPQHNPQPSKQQSLLSILSDPGPTSFTSTESGRSSSALPPTRHYKPCLNMSSPGELSNELSSNRH
249
292
157
288
349
230










Molecular Recognition Features






MoRF SequenceStartStop




1) YSILGR
239
244