<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03076

Description Uncharacterized protein
SequenceMTTKSEKAVGIDLGTTYSCVGVWMNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDSAKNQVALNPHNTVFDAKRLIGRRFSDPSVQSDMTHWPFKVVSGPGDKPMIVVSYKNEEKQFSPEEISSMVLIKMREVAESFLGHAVKNAVVTVPAYFNDSQRQATKDAGSISGLNVLRIINEPTAAAIAYGLDKKGTQTGERNVLIFDLGGGTFDVSLLTIEEGVFEVKATAGDTHLGGEDFDNRLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYATISRARFEEMNMDLFRKCMDPVEKVLRDAKIDKNRVHEVVLVGGSTRIPKIQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILTGEGSDKVQDLLLLDVAPLSLGLETAGGVMTVLIPRNTTVPCKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGTFELKGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNQITITNDKGRLSKEEIEKMVQDAEKYKAEDEQVKKRVEAKNSLENYAYNMRNTVKDEKLAQKLDQEDKQKIEKAIDETIEWIEGNQLAEVDEFEYKLKELEGICSPIISKMYQGGASAGGANDGMPGDGGSGGSGGGQGPKIEEVD
Length650
PositionUnknown
OrganismBrassica oleracea var. oleracea
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.06
Grand average of hydropathy-0.442
Instability index36.58
Isoelectric point5.25
Molecular weight71420.83
Publications
PubMed=24916971

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03076
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      98.01|      34|     189|     169|     204|       1
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  169-  204 (50.20/44.61)	GLNVLRIINePTaAAIAYGLD.KKGTQTGE.....RNVLIFD
  361-  400 (47.82/32.59)	GKELCKSIN.PD.EAVAYGAAvQAAILTGEgsdkvQDLLLLD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.58|      17|      21|      37|      54|       2
---------------------------------------------------------------------------
   37-   54 (26.01/20.71)	NRT..TPSYVAFtDTERLIG
   59-   77 (25.56/15.34)	NQValNPHNTVF.DAKRLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.46|      24|     395|     101|     126|       6
---------------------------------------------------------------------------
  101-  126 (37.74/32.77)	GDKPMIVVSykNEEKQFSPEEISSMV
  501-  524 (40.72/27.65)	GVKNQITIT..NDKGRLSKEEIEKMV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03076 with Med37 domain of Kingdom Viridiplantae
Unable to open file!