Description | Uncharacterized protein |
Sequence | MINSNQVSRSHLPEVQKPKVPQTNWSEHAKAFEDPSSRTKHLSSGFLYALESQKPRKSRDMAARSIAFPSVNAHTLAHPQIAKAWSALSSLSLNKTYLRPGITPPVDDGGTNGSYSARERSTVKVTCSTDGSFYSNNQQNQSQMGVPGTGRNFHSFPPPVPGDGKIFAEKFPRINDEAREPETCSAHLNGVEKPFRSSAFAAEQLGSGEACLDEIDDDILQNIDVDQIMMEHYQSTSTPPPSVSSLPSRTPPVDRSASRREEECCLPPELCSNCSHGIKLGLCPEASTHLEQMKNMLIAISNELLDDDTDLSPDRIQELRQERLLLKKQIQQLEDHTRDKEKHKSQFLSSTATRASQCETPKSTNLRFDHPQTDSQTHFNEQGRYASDSWNMPKDSSLSVDRYGLSSAPVEREQYVPRIIEVTYTEGSNDQKWSSRDFPWTRKLEVSNKKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALICQGITLVISPLVSLIQDQIMNLLQANIPAASLSAGMEWSEQLKIFQELSSEHSKYKLLYVTPEKVAQSDSLLRHLDNLNSCGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLLYSVVPKTKKCLEDIDKFIKENHFDECGIIYCLSRNDCEKVAQKLQEFGHKAAFYHGSIEPTQRALVQKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRASCVLYYGYGDYIRVKHMISQVGVDQNPMAIGYNRVASSGRLLETNTENLLRMVRYCENEVDCRRFLQLVHFGEKFDSTNCKRTCDNCSSSQSLIDKDVTLITRQLVELVKQTGERFSSSHILEVYRGSLNQMVKKHRHETLQFHGAGKHLTKLEVSRILHYLVTEDILVEDVRKSDMYGSVSSLLKVNKSKAASLFSGSQTIMMRFPSSVKVLKPCKAAPTPAKAPLVSADAPPEDVNLSAIMYTALRKLRTLLVKEAPDGVMAYHIFGNATLQQMSKKIPRTKEELLEINGLGKAKVLKYGERLLETIESTVNEYYGTSKKEESMISPDSGKRRRDENISPNVTEEDDDFAESSSQSCKKTVRSKSSEVLHGECVDGGGVGMVMEKLDFDFDFEDEDGSEIRPEGRVLPW |
Length | 1185 |
Position | Unknown |
Organism | Brassica oleracea var. oleracea |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.514 |
Instability index | 50.93 |
Isoelectric point | 6.61 |
Molecular weight | 132703.63 |
Publications | PubMed=24916971 |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | 3'-5' DNA helicase activity GO:0043138 IEA:InterPro ATP binding GO:0005524 IEA:UniProtKB-KW hydrolase activity GO:0016787 IEA:UniProtKB-KW nucleic acid binding GO:0003676 IEA:InterPro |
GO - Biological Process | DNA recombination GO:0006310 IEA:InterPro DNA repair GO:0006281 IEA:InterPro DNA replication GO:0006260 IEA:InterPro |
Binary Interactions |
Repeats | >MDP03073 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 481.87| 136| 144| 779| 922| 1 --------------------------------------------------------------------------- 682- 769 (86.79/49.06) .......................................................YCLSRNDCEKVAQkLQEFGH..KaaFYHGSIEPT......QRALVQKqwskdEVNIIcaT..VAFGM.GINKPDVRF.......VIHHSLPKSIEG...YHQECGR...AGR 779- 922 (218.43/160.87) YYGYGDYIRVKH..MISQV...GVDQNPMaigYNRVASsgrLLETNTENLLRMvrYCENEVDCRRFLQ.LVHFGE..K..FDSTNCKRTCDNCSSSQSLIDK.....DVTLI..T..RQLVE.LVKQTGERFSSSHILEVYRGSLNQMVKK...HRHETLQFHGAGK 923- 1069 (176.66/112.32) HLTKLEVSRILHylVTEDIlveDVRKSDM...YGSVSS...LLKVNKSKAASL..FSGSQTIMMRFPS.SVKVLKpcK..AAPTPAKAPLVSADAPPEDVNL.....SAIMY..TalRKLRTlLVKEAPDGVMAYHIFG..NATLQQMSKKiprTKEELLEINGLGK --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 127.34| 42| 85| 179| 226| 2 --------------------------------------------------------------------------- 179- 226 (61.25/60.55) RE......PETCSAHLNGVE...KPFRSSAFaaEQLgsgEACLDEIDDDILQNiDVD 260- 310 (66.09/44.44) REeecclpPELCSNCSHGIKlglCPEASTHL..EQM...KNMLIAISNELLDD.DTD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 269.79| 74| 140| 446| 522| 3 --------------------------------------------------------------------------- 446- 522 (121.15/94.93) VSNK.KVFGNHSFRPNQRE..IINAT...MSGSDVFVLMPTGggkSLTYQLPALICQGI..TLVISPLVSLIQD.QIMNLLQANIP 532- 585 (49.52/30.37) WSEQlKIFQELSSEHSKYK..LLYVTpekVAQSD...........SLLRHLDNLNSCGLlaRFVIDE................... 589- 657 (99.11/69.01) VSQ....WG.HDFRPDYQSlgILKQK...FPNIPVLALTATA.....TASVKEDVVQAL..GLV..NCVVFRQSfNRPNLLYSVVP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 258.20| 89| 299| 32| 151| 7 --------------------------------------------------------------------------- 32- 151 (127.13/123.75) FEDPS.SRTKHlSSGFlyaLESQKPRKSRDMAARS..IAF..PSVNAHTLAHPQ...............IAKAWSALSSLSLNktylrpgitppvddggtngsysaRERSTVKV..TCSTDGSfysnNQQNQSQMGVPGTGR 333- 443 (131.07/81.53) LEDHTrDKEKH.KSQF...LSSTATRASQCETPKStnLRFdhPQTDSQTHFNEQgryasdswnmpkdssLSVDRYGLSSAPVE.......................REQYVPRIieVTYTEGS....NDQKWSSRDFPWTRK --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) EIRPEGRVLPW 2) FLYAL 3) KLDFDFDF | 1175 46 1161 | 1185 50 1168 |
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