<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03070

Description Uncharacterized protein
SequenceMMKSGEKREEIITLAIDRDKESQNALKWTVDNLVSKGQTLTLLHVKLKQFPSLPYSVSYPNRSGDDGTELFLPFRCYCARKDVLCQDVIVEDISAAKGILDYVQKNAIETLVLCASKMNLLRFKAADVSNTVMKRAPSFCTVYAISKGKISSMKSATSSLPNSTMRSNMNVERRQHTMHRIHDEIQIEIKSPFMRRGYEGRYQPSMTDSDISFVSSGRPSVDLMFPSFGDHVDVPRLSVNSDYEENRISFATSSSSSDKQSIDLGSSYTAFSSSSGRPSCSLSTQDEIEAEMRRLKMELKHTMDMYNSACKEAISAKKAATELHKWKADKERKLEEVRLSKEEAMAMAESEKEKSRAAIETAVAAHRIAELEAQKTKHIIEENNKSVVKTTDLRYRKYIIEEIEEATEDFSPSRKIGEGGYGPVYKGALDFTQVAIKVLRPDAAQGRSQFQQEVEVLTSMRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGNSPALSWQLRFRIAAEIATGLHFLHQMKPEPLVHRDLKPGNILLDQHYVSKISDVGLARLVPPSVADTATQYRMTSTAGTFCYIDPEYQKTGMLGTKSDIYSFGIMLLQILTAKPPMGLTYHVERAIENGTFAEMLDPSVPDWPFEEALVAAKLAVQCAELRRKDRPDLGNVVLPELNRLRTLAEESMLPTNIGGSKRPTRNRNNNIYIQSPLSTTSLHEIMSGPQLHYASDTPRTSAEVSAITTSSPGHSGFNIPSAGALDPLRGDSWDCGCPDTRVIKKNWTSSTNFITNFIANFIGILH
Length798
PositionTail
OrganismBrassica oleracea var. oleracea
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.07
Grand average of hydropathy-0.398
Instability index50.75
Isoelectric point7.03
Molecular weight89112.52
Publications
PubMed=24916971

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03070
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.64|      17|      17|     248|     264|       1
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  211-  223 (23.89/10.77)	ISFV....SSGRPSVDL
  248-  264 (28.02/13.74)	ISFATSSSSSDKQSIDL
  267-  282 (24.72/11.37)	.SYTAFSSSSGRPSCSL
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.48|      17|      19|     342|     360|       2
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  344-  360 (28.07/24.98)	AMA...MAESEKEKSRAAIE
  362-  381 (22.41/10.54)	AVAahrIAELEAQKTKHIIE
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     264.54|      82|     533|     112|     199|       3
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  112-  199 (129.86/95.56)	VLCAskmNLLRFKAADVSNTVMkraPSFCTVYAISKGKISSMKSATSSLPNSTMRSNMNVERRQHT..MHRIHDEIQIEIKSPFMRRGYE
  652-  735 (134.69/84.61)	VQCA...ELRRKDRPDLGNVVL...PELNRLRTLAEESMLPTNIGGSKRPTRNRNNNIYIQSPLSTtsLHEIMSGPQLHYASDTPRTSAE
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      99.18|      29|      73|     534|     563|       4
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  534-  563 (45.58/37.62)	KPgNILLDQHYVSKISDVGLARLVPPSVAD
  610-  638 (53.60/38.83)	KP.PMGLTYHVERAIENGTFAEMLDPSVPD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03070 with Med32 domain of Kingdom Viridiplantae
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