<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03069

Description Uncharacterized protein
SequenceMARNRKDKDGGFGTDGLVAVAIDKDKSSQNSLKWAVDNLLQKGQTILLVHVKPRASSVSTNPSTNPNSSKTSQTNGDSSVVTVEPDGSYKQLFLPFRCLCSRKEIQCKDVLLEDSDVGKALVEYANQVIIEVLVVGASSKGGFLRFNKPTDIPVIITKNAPDFCTVYVITKGKLSTKRAASRTAPSVSPLRIEIQQNSSRPQYPRLPSPATTNTRAAERKSFESQRRSLDDQSESSRPPFTRRGLNGRSSYGDLSIPDPDISLFSSGRPSTERHSLSLFDNSDQNRTPPPRLSNFSDIDNGSFESMNYGQGSMDISSPPASSRDSFENERFSSASPGGEDVEAEMRRLKLELKQTMEMYSSACKEALTSKRKATELQRWKLEEERKYEEAKQAEEAALAIAEKEKAKSKAALEAAEAAQRIAEMESKKRISAEMKALKETEEKKKAVNALANADVRYRKYSIEEIEDATEYFDEKYKIGGGGYGPVYKCYLDQTPVAVKALHTDAAQGRSQFKQEVEVLSCMRHPHMVLLLGACPEGGCLVYEFMSNGSLEDRLFQQGDSPPLSWQTRFRIAAEIGTVLLYLHQTKPEPLVHRDLKPANILLDRNFVSKVADVGLARLVPPSVANTVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMYLQMITGKPPMGLTRYIESALEKGNLKDVLDPSVSDWPVEDTTEFAKLALKCAEIRRKDRPDLSKVILPELNRLRALAEESSRSAVVINSPGPSPTVSQTSSPKL
Length769
PositionTail
OrganismBrassica oleracea var. oleracea
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.06
Grand average of hydropathy-0.548
Instability index52.13
Isoelectric point8.39
Molecular weight85083.31
Publications
PubMed=24916971

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
mRNA binding	GO:0003729	IEA:EnsemblPlants
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process
root epidermal cell differentiation	GO:0010053	IEA:EnsemblPlants









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03069
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     161.02|      44|      53|     218|     270|       1
---------------------------------------------------------------------------
  218-  266 (73.74/51.03)	ERKSFESQ...RRSLDDQS..ESSRPPFTRRGLNGRSSYGDlsipdPDISLFSS
  272-  297 (45.06/16.65)	ERHSL.......SLFDNSD..QNRTPP...................PRLSNFSD
  299-  339 (42.22/16.14)	DNGSFESMnygQGSMDISSppASSRDSFENERFSSASPGGE.............
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.53|      17|      19|     384|     402|       3
---------------------------------------------------------------------------
  386-  402 (28.35/17.20)	KYEEAKQAEEAALAIAE
  407-  423 (25.18/10.83)	KSKAALEAAEAAQRIAE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.10|      24|     118|     595|     618|       4
---------------------------------------------------------------------------
  595-  618 (40.78/33.96)	LKPANI.LLDRNFVSKVADVGLARL
  714-  738 (38.33/31.41)	LKCAEIrRKDRPDLSKVILPELNRL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.47|      11|      56|     370|     385|       5
---------------------------------------------------------------------------
  344-  354 (18.47/ 9.31)	EMRRLKLELKQ
  375-  385 (20.01/ 6.62)	ELQRWKLEEER
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03069 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) PSVSPLRIEIQQNSSRPQYPRLPSPATTNTRAAERKSFESQRRSLDDQSESSRPPFTRRGLNGRSSYGDLSIPDPDISLFSSGRPSTERHSLSLFDNSDQNRTPPPRLSNFSDIDNGSFESMNYGQGSMDISSPPASSRDSFENERFSSASPGGEDVEAEMRRLKL
185
350










Molecular Recognition Features






MoRF SequenceStartStop




NANANA