<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03054

Description Uncharacterized protein
SequenceMSARRVDNGIVTVIAIDKDKNSQHALKWAVENILVDSPNCVLLHKETLEHIYNVTIKMILINSFFFSEDSALEKELVIISQSPLLQQTTYVSITYYTKLLVQIIPKEVLLREIDISSAIVSYITNNSISNIVVGASSHNAFFKKFKSPDVPTTLLKTSPETCAVFVVSKGKLLKSKSASQALKHHPVQQSLSTLLYNNEPTTSTYSSDSERESFVSTQHSKPMSDFSQTSSPPRISSTQTMSEFSQSDTDSGSYGMVSTVTSYTISQSSTTNGSSISSTSTESPHAVTFMEQQNQNLEAEVRRLRQELKQYNPSNNKESSQEHKLPRAKGVRRLDQAIEMPRALSEENQKRLSAIQAAEIAKKLAKMESQKRKLLEMQAKLEKQRMASNVSYRRYSIKDVEGATNGFSDSLKIGEGGYGPVYKAVLDYTSVAIKILKSGITQGLKQFQQEVEVLSSMRHPNMVILLGACPEYGCLVYEYMENGTLEDRLFCKDNTPPLSWRARFRIAAEVATGLLFLHHAKPEPLVHRDLKPANILLDRHFTSKISDVGLARLVPSSVADSYSNYHMTSAAGTFCYIDPEYQQTGLLGVKSDLYSFGVVLLQMITAMPAMGLGHKVEMAVENNKLSELFDPKVSEWPEEETLGLAKLALQCCELRKRDRPDLASVVLPALNRLREFAREDHERIKDRTSHVSQSNYSDPVPSSQVSFLEPFCYTWTRI
Length718
PositionTail
OrganismBrassica oleracea var. oleracea
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.07
Grand average of hydropathy-0.342
Instability index46.95
Isoelectric point7.93
Molecular weight80366.54
Publications
PubMed=24916971

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03054
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      77.41|      18|      19|     223|     240|       1
---------------------------------------------------------------------------
  203-  222 (17.90/ 6.32)	.STYSSD...SERESFVSTQhskP
  223-  240 (33.68/18.06)	MSDFSQT...SSPPRISSTQ...T
  241-  261 (25.84/12.22)	MSEFSQSdtdSGSYGMVSTV...T
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.99|      17|     134|     306|     323|       2
---------------------------------------------------------------------------
  290-  306 (26.89/19.65)	MEQQNQNLEAEVRRLRQ
  308-  324 (28.10/15.06)	LKQYNPSNNKESSQEHK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.48|      16|      24|     349|     372|       3
---------------------------------------------------------------------------
  332-  347 (27.67/17.79)	RRLD..QAIEMPRALSE.E
  350-  368 (15.81/25.93)	KRLSaiQAAEIAKKLAKmE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.25|      24|      24|      74|      97|       4
---------------------------------------------------------------------------
   74-   97 (41.38/31.61)	KELV.IISQSPLLQQTTYVS..ITYYT
   98-  124 (29.87/20.57)	KLLVqIIPKEVLLREIDISSaiVSYIT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.62|      15|      25|      23|      37|       6
---------------------------------------------------------------------------
   23-   37 (25.42/19.18)	QHALKWAVENILVDS
   49-   63 (25.20/18.94)	EHIYNVTIKMILINS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.02|      18|     145|     538|     557|       7
---------------------------------------------------------------------------
  538-  557 (26.64/26.24)	DRhfTSKISDVGLARLVPSS
  686-  703 (34.38/24.45)	DR..TSHVSQSNYSDPVPSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.39|      21|     260|     171|     194|       8
---------------------------------------------------------------------------
  171-  194 (24.88/29.25)	KLLKSkSASQALKHhpVQQSLSTL
  434-  454 (35.51/24.52)	KILKS.GITQGLKQ..FQQEVEVL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03054 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GMVSTVTSYTISQSSTTNGSSISSTSTESPHAVTFMEQQNQNLEAEVRRLRQELKQYNPSNNKESSQEHKLPRAKGVRRLDQAIEMPRA
2) YSSDSERESFVSTQHSKPMSDFSQTSSPPRISSTQTMSEFSQSDTDSGS
255
205
343
253










Molecular Recognition Features






MoRF SequenceStartStop




NANANA