<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03047
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAELGQQTVDFSALVGRAAEESFLSLTELVEKAKSPELSDTDKKLSLLKYVVKTQQRMLRLNALAKWCKQVPLINSCQDLGSSLSSHDICFTQAADSLFFMHEGLQQARAPVYDVPSAIEVLLTGSYQRLPKCVDDVGMQCSLDEQQQKPALRKLEVLVRSKLLEITLPKEITEVKVSKGTVTLSVEGEFKVLVTLGYRGHLSMWRILLLDLLVGERSGGPIKLEVTRRHILGDDLERRMSVAENPFTILYAVLHELCVAIVMDTVIRQVRTLLHGRWKDAIRFDLISDTGTAPANQEGEADSVSLKTPGVKLMYWLDYDKNNAGSFVKIEPVSDLQIKCSHSTFVIDPLTGKEAEFSLDQSCIDVEKLLLKAICCNRYTRLLEIQKELLRSDRICRAPSDVILQAFLDEPGSEGGNMIDSKQQIEPEVLRVRAYGSSFFTLGINIRTGKFLLQSSKSVLTPSILVEFEDALNQGSISAVDAFINLRSKSILHFFAAIGKFLGLEVYEHGFGVNKAPKSLSDGSSILALGFPDCESSHLLLMELEKDFTPLFKLAETQTDGSGKPQFLNDLSNVLRVKKIDIGQIRILEDDLNLITSDVARFVSSFSDAERSLNQASGHRGPGLVEESLAEMSGGQLSFSSIVDEVFGHQKVTTSADGKAPLLTSYQSDSFYSMQVPLESSSFNLLSSPPPGKGSAMMKNPNKELSMVLSPSLTVVSESADLAVTSDGPLLRKDQKSRKRSASDLLRLIPSLQGVEGVTHPNKKSKTSASQALSTAVVTSTKAIGCSYGDLIAEANKGNAPSSVFVYALLHVVRHSSLSIKHAKLTSQMEALDIQYVEEMGLRDSFSDIWFRLPFAQNDSWQHICLQLGRPGSMCWDVKINDQHFRDLWELQKGSKSTPWGSGVHIANSSDVDSHIRYDPEGVVLTYQSVEADSIKKLVADIQRLSNARRFSLGMRKLLGIKADEKTEEPGGGNAAVKGPAGGKGGGEAVDRWRAFKIEAVGLTSLWFSFGSGILARFVVEWESGKDECTMHVSPDQHWPHTKFLEDFINGGEVESLLDCIRLTAGPLTALAAATRPARASSATGVTVVPATATSRQSNQTQQTQPSTLAAPNAVGQSASGSAVASPSPAPSPLGGSFHGAAGRSGPGIVPSSLLPIDVSVVLRGPYWIRIIYRKRFAVDMRCFAGDQVWLQPATPPKGGASIGGSLPCPQFRPFIMEHVAQELNGLEPNLTGSQGATNPSGSRVNFSPSSAMSRAVMSRVGSVASGSLVVGSGLSVRRPPGSGVPAHVRGELNTAIIGLGDDGGYGGGWVPLVALKKVLRGILKYLGVLWLFAQLPDLLREILGSILKENEGALLNLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVRRFHHQQQQQNGSSGTAQEELTQSEIGEICDYFSRRVASEPYDASRVASFITLLTLPIPVLREFLKLIAWKKGLSQSQQAVEVAPAQRPRIELCLENHSGADVETSCAAKSNIHFDRPQSTVDFALTVVLDPAHIPHINAAGGAAWLPYCVSVRLRYTFGDNPSVTFLGMEGSHGGRACWQRVDDWEKCKQRVSRTVEVNGSAAGDLTQGKLKLVADSGQRTLHLCLQGLREGSSNNNTLQKEFTI |
Length | 1636 |
Position | Tail |
Organism | Brassica oleracea var. oleracea |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
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Aromaticity | 0.07 |
Grand average of hydropathy | -0.118 |
Instability index | 45.87 |
Isoelectric point | 6.68 |
Molecular weight | 177893.93 |
Publications | PubMed=24916971
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Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
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GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
plasmodesma GO:0009506 IEA:EnsemblPlants
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GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
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GO - Biological Process | cold acclimation GO:0009631 IEA:EnsemblPlants
positive regulation of cell population proliferation GO:0008284 IEA:EnsemblPlants
regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
systemic acquired resistance GO:0009627 IEA:EnsemblPlants
|
Interaction
Repeat regions
Repeats |
>MDP03047
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 385.74| 93| 264| 1210| 1310| 1
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1093- 1168 (94.06/56.84) ...........................ATS.RQSNQTQQTQP.STL..AAPNAVGQSASGSAVASPspapsplGGSFHGAAGRSGPGIVPSSLLPIDVSVVLRGPY.....W
1210- 1310 (144.33/118.68) PQFRPFImehvaqELNgLEpNLTGSQGATN.PSGSRVNFSPS.SAMSRAVMSRVGSVASGSLVVGS.......GLSVRRPPGSGVPAHVRGELNTAIIGLGDDGGYGG..GW
1475- 1570 (147.36/98.08) PAQRPRI......ELC.LE.NHSGADVETScAAKSNIHFDRPqSTVDFA.LTVVLDPAHIPHINAA.......GGAAWLPYCVSVRLRYTFGDNPSVTFLGMEGSHGGraCW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 327.69| 113| 264| 120| 249| 2
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120- 249 (158.29/155.55) EVLLTGSYQRLPkcvDDVGMQCSLDEqqqkPALRKLEVLVRSKLLEitlPkEITEVKV.SKGTVTLSVE...GEF......KVL...VTLGYRGHLSMWRILLLDLLVGERSGGPIKLEVTRRHILGddLErrmsVAENPFTI
388- 513 (169.40/117.50) ELLRSDRICRAP...SDVILQAFLDE....PGSEGGNMIDSKQQIE...P.EVLRVRAyGSSFFTLGINirtGKFllqsskSVLtpsILVEFEDALNQGSISAVDAFINLRSKSILHFFAAIGKFLG..LE....VYEHGFGV
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