<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03037

Description Uncharacterized protein
SequenceMAARRVKGKDSNAVTAIAIDKDKNSQHALKWAVENIVVNSPNCILLHIMAKEVLLHDIDIASAIVDYINNNSIANIVLGATARNSFLKKFKTVDVPGTLLKTTPDTCAVFVVSKGKLLTSKSASRPQTPQHSPQPPKPHPHSAISDPGPASSITFSDSGRSSPALNGGFSPPTAHFTPSIIRSSPSRFSNELSPSGHSGESNASFYSILGRSTYGGSSHSSTSMSELADGEERFSGSSYITEQNHNLEAEVRRLRLELQQYNVSMGRESAPHLQGPSAAAESVKLKEAKVARDMLRAMSEMDKHKTQSQIQATEMARRLAEMEKQKRRLVEMQARFKEQDMASNVSYRRYSIRDVEGATDGFSDAQKIGEGGYGPVYKAVLENTSVAIKILKSDVSQGLKQFQQEVEVLSCMRHPNMVILLGACPEYGCLVYEYMENGTLEDRLFCKDNTPPLSWRERFRIAAEIATGLLFLHQAKPEPLVHRDLKPANILLDRHLNSKISDVGLARLVPPAVADSFTNYHMTAAAGTFCYIDPEYQQTGMLGVKSDLYSFGVVLLQILTAMPAMGLSHRVEKALERKRLIEVLDPKVSDWPEEETQVLAQLALQCCELRKRDRPDLATVLLPALSKLREIATEDHDDDRIFSVPRAHNSVHDVDDSDRIFSVPRAHNSVPRSPISSSSQWMH
Length683
PositionTail
OrganismBrassica oleracea var. oleracea
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.06
Grand average of hydropathy-0.379
Instability index51.82
Isoelectric point7.35
Molecular weight75462.83
Publications
PubMed=24916971

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03037
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.40|      17|      18|     635|     651|       1
---------------------------------------------------------------------------
  635-  651 (37.91/23.28)	DHDD.DRIFSVPRAHNSV
  653-  670 (32.50/18.99)	DVDDsDRIFSVPRAHNSV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      70.69|      19|      19|     286|     304|       2
---------------------------------------------------------------------------
  286-  304 (31.97/17.66)	K.EAKV.ARDM.LRAMSEMDKH
  305-  325 (21.01/ 9.56)	KtQSQIqATEM.ARRLAEMEKQ
  337-  354 (17.71/ 7.12)	K.EQDM.ASNVsYRRYSIRD..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      90.52|      21|      21|     155|     175|       3
---------------------------------------------------------------------------
  138-  162 (33.55/16.34)	PHPHSAISDPgpasSIT........FSDS.GRSS
  163-  184 (33.58/16.36)	PALNGGFSPP....TAH........FTPSiIRSS
  185-  212 (23.39/ 9.35)	PSRFSNELSP....SGHsgesnasfYSIL.GRS.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.14|      17|      21|     590|     610|       4
---------------------------------------------------------------------------
  590-  610 (24.58/26.56)	DWPEEETQVLAQLAlqccELR
  613-  629 (28.57/17.11)	DRPDLATVLLPALS....KLR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.49|      14|      24|     444|     457|       6
---------------------------------------------------------------------------
  444-  457 (29.07/19.41)	LFCKDNTP.PLSWRE
  470-  484 (22.42/13.25)	LFLHQAKPePLVHRD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03037 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GGSSHSSTSMSELADGEERFSGSSYITEQNHN
2) SKSASRPQTPQHSPQPPKPHPHSAISDPGPASSITFSDSGRSSPALNGGFSPPTAHFTPSIIRSSPSRFSNELSPSGH
215
120
246
197










Molecular Recognition Features






MoRF SequenceStartStop




NANANA