<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03034

Description Uncharacterized protein
SequenceMAAKSDKAIGIDLGTTYSCVGAWINDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPHNTVFDAKRLIGRRFTDPSVQSDMRHWPFKVVSGPGDKPMIVVSYKNEEKQFSPEEISSMVLVKMKEVAESFLGHTVKNAVVTVPAYFNDSQRQATKDAGSISGLNVLRIINEPTAAAIAYGLDKKGTKTGERNVLIFDLGGGTFDVSLLTIEEGVFEVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDVSGNARALRRLRTACERAKRTLSSTAQTTIEIDSLHEGVDFYATISRARFEEMNMDLFRKCMDPVEKVLRDAKLDKSRVHEVVLVGGSTRIPKIQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILTGEGSDKVQDLLLLDVAPLSLGIETAGGVMTVLIPRNTTVPCKKEQVFSTYADNQPGVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNQITITNDKGRLSKEEIEKMVQDAEKYKAEDEQVKKRVEAKNSLENYAYNMRNTVRDEKLAQKLDQEGKQKIEKAIDEAIEWIEGNQLAEVDEFEYKLKELEGICNPIISKMYQDGAGAGYPDGGMPASGGSGGAGGPKVEEVD
Length647
PositionUnknown
OrganismBrassica oleracea var. oleracea
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.06
Grand average of hydropathy-0.419
Instability index35.23
Isoelectric point5.43
Molecular weight71000.57
Publications
PubMed=24916971

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03034
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      74.24|      18|      21|      37|      54|       1
---------------------------------------------------------------------------
   15-   32 (17.18/ 6.72)	..T..TYSCVGawINDRVEIIP
   37-   54 (32.60/18.05)	NRT..TPSYVA..FTDTERLIG
   59-   77 (24.46/12.07)	NQValNPHNTV..F.DAKRLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.75|      10|      26|     205|     214|       2
---------------------------------------------------------------------------
  205-  214 (19.09/10.40)	LGGGTFDVSL
  233-  242 (19.67/10.93)	LGGEDFDNRL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.46|      24|     397|     101|     126|       5
---------------------------------------------------------------------------
  101-  126 (37.74/32.86)	GDKPMIVVSykNEEKQFSPEEISSMV
  501-  524 (40.72/27.73)	GVKNQITIT..NDKGRLSKEEIEKMV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03034 with Med37 domain of Kingdom Viridiplantae
Unable to open file!