<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03024

Description Uncharacterized protein
SequenceMCEKREESITLAIDRDKESQNALKWTVDNLVSKGQTLTLLHVKLKQSSSLPSGNKSSDDGAELFLPFRCFCARKDVLCQDVIVEDMSAAKGILDFVQKNAVETLVVGASKMTLLRRFKAPDVSSTVIKKAPSFCTVYSISKGKISSMKSSTSSLPSSTMRQRVQTQKSNMNIQRRQSTMQRTHDEIEIKSPFTRRGYEGTYQASMMDSDISFVSSGRPSVDLMFPSFHDHVDVPRLSLNSEYEENRISIATSCSSDKQSIDIGSSYAAFSSSSLGSGRQSCSLSSQDEMEAEMRRLKMELKYTMDMYNTACKEAISAKKAATELHKWKADKELKLEEVRLAKETAMQMAESEKEKSRAAMETAMASHRIAEFEAQKRKHIQTAEEKKRATSSLAKTDLRYRKYIIEEIEEATEDFSPSRKIGEGGYGPVYKGSLDYTQVAIKVLRPDAAQGRSQFQQEVEVLTCMRHPNMVLLLGACPEYGCLVYEYMANGSLEDCLFRRGNSPILSWQLRFRIAAEIATGLHFLHQMKPEPLVHRDLKPGNILLDKHFVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGTKSDIYSFGIMLLQILTAKPPMGLTHHVEKAIQNGKFPEMLDPIVPDWPVEEALVAAKLALKCAELRRKDRPDLGHAVLPELNRLRALAEEIMPSVNFGRSLRPSPNTTTNRNNCHIQRPVATTSLYV
Length724
PositionTail
OrganismBrassica oleracea var. oleracea
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.06
Grand average of hydropathy-0.420
Instability index52.38
Isoelectric point8.67
Molecular weight81139.12
Publications
PubMed=24916971

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03024
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     100.00|      29|     102|     175|     205|       1
---------------------------------------------------------------------------
  175-  205 (48.29/36.80)	RQSTMQRTHDEIEikSPFTRRGYEGTYQASM
  278-  306 (51.71/33.23)	RQSCSLSSQDEME..AEMRRLKMELKYTMDM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     211.11|      70|     127|     516|     594|       2
---------------------------------------------------------------------------
  516-  594 (102.23/93.20)	AEIATGLhflhQMKPEPLVHRDlKP..GNILLDKhfVSKISdvGLARLVPPSV..ADTVTQYRMTSTAGTFCYIDPEYQQTGM
  649-  722 (108.87/70.56)	ALVAAKL....ALKCAELRRKD.RPdlGHAVLPE..LNRLR..ALAEEIMPSVnfGRSLRPSPNTTTNRNNCHIQRPVATTSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.90|      14|      39|     214|     227|       4
---------------------------------------------------------------------------
  214-  227 (26.53/18.64)	SSGRPSVDL..MFPSF
  254-  269 (19.37/11.55)	SSDKQSIDIgsSYAAF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     214.16|      72|     346|      90|     163|       5
---------------------------------------------------------------------------
   90-  163 (110.82/89.03)	KGILDFVQkNAVETL....VVGASK....MTLLRRFKAPDVsSTVIKKAPSF.CTVYS.ISKGKISS..MKSSTSSLPSSTMRQRV
  431-  514 (103.34/73.62)	KGSLDYTQ.VAIKVLrpdaAQGRSQfqqeVEVLTCMRHPNM.VLLLGACPEYgCLVYEyMANGSLEDclFRRGNSPILSWQLRFRI
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03024 with Med32 domain of Kingdom Viridiplantae
Unable to open file!