<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02993

Description Uncharacterized protein
SequenceMSARRIDNGLITAIAIDKDKNSQHALKWAIENILVDSPHRHCVLLHKITLWFSTYYTMACQIMAKEVVLRDSDISNAIVNYITNYSISNIVVGSSAHKSFFKKFKSPDVPTTLLKTAPETCAVFVVSKAKLKKSKSASQAQKHRHRQQDLSSLLYNYDSTSSCDSERQSSLSAQYNNSNSYSSQSFSPRISPPQYLSEFSQSDTKNSSYGVVSTMTSYTISQSSTTKGSSISSTSMNQHLEAEEALEMLRALSEEQQERHSDIQAAEMAKQLVKMESQKRRLLELQAKLGKQKMTDNVSYRRYSTEDVEEATNGFSDALKIGEGGYGPVYKAVLDYTFVAIKLMKSGITQGLKQFQQEVEVLSSMRHPNMVILLGACPDYGCLVYEYMESGTLEDRLFCKDNTPPLPWRARFRIAAEIGTGLLFLHSAKPEPLVHRDLKPANILLDRHFTSKISDVGLARLVPPCGGNSISNYHITAAAGTFCYIDPEYQQTGMLGVKSDLYSFGVVLLQIITAMPAMGLGHRVETAIENNKLSEVLDPKVSDWPEEETLELAKLALRCCEMRKKDRPDLASVLLPALKRLREFAREENEHIQDIPSQISESSKSETLAAVPNSQINKELTWRVREIQEERDRLKMRSHSVPKRSRPPRAQRRQYKGNRWSLMSCAPSKVQWGGLP
Length676
PositionTail
OrganismBrassica oleracea var. oleracea
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.07
Grand average of hydropathy-0.455
Instability index56.64
Isoelectric point8.87
Molecular weight76020.77
Publications
PubMed=24916971

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02993
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.24|      13|      19|     150|     162|       1
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  150-  162 (22.77/13.27)	LSSLLYNYDSTSS
  171-  183 (23.47/13.90)	LSAQYNNSNSYSS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     145.01|      34|      37|     540|     573|       2
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  540-  573 (56.23/35.25)	KVSDWPEEETLELAKLALRCCEMRKKDRPDLASV
  580-  611 (47.37/28.57)	RLREFAREENEHIQDIPSQISESSKSE..TLAAV
  623-  650 (41.41/24.08)	RVREIQEERD....RLKMRSHSVPKRSRPPRA..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.18|      18|      19|     241|     259|       3
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  241-  259 (24.70/19.36)	EAEEAlEMLRAL..SEEQQER
  262-  281 (25.48/15.05)	DIQAA.EMAKQLvkMESQKRR
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     177.49|      56|      85|     373|     436|       5
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  373-  436 (90.44/90.43)	LLGACPdyGCLVYEY...MESGTledrlFCKDNtPPLPWRARFRIAAEI...GTGLLFLHSAKPE.PLVHR
  461-  523 (87.05/63.16)	LVPPCG..GNSISNYhitAAAGT.....FCYID.PEYQQTGMLGVKSDLysfGVVLLQIITAMPAmGLGHR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02993 with Med32 domain of Kingdom Viridiplantae
Unable to open file!