<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02991

Description Uncharacterized protein
SequenceMDFFFKNSYLEPKPALPVSTGSNHASPSQSLTIAVAISGSTKSKNVLKWALKKFASEKNIVFKLIHIHPKLTSIPTPSGNIVSISEAPEDVAATYRRQVMEETKETLLKPYKKMCERKKVVVELLVLESNSVAVAITREVNQRSISRLVIGRSCNVGLYGNNDITEKISNYVSNLCTVYVVSKGVYILSKEKLPSASDTERNEILRDTGSERSSSCSSGSGTISDAMSSTNALKSKSLGLSNKRLQHLPTIVRGVSGRVETDSDETRSVCSDAPEEVSKIETSYTFDDRKDGNSHISSNPEYENVTDPGEDYFTDDQDTRQEITKLRDELRQAQEMYAVAQVETLDASRKLNELKLEDLTLKDQGTKGLAEKETQKKRMEEKETAQRREAEMKVAREAKEKEKLVESSLVAPKVAPKVQYQEFTWEEISTATSSFSQELKIGEGAYGAVYKCSLHHTVAAVKVLHSPESNLSKQFDQELEILSKIRHPHLVLLLGACPESGTLVYEYMENGSLEDRIFQVNNSQPLPWFVRFRIAWEVASALVFLHKSKPTPIIHRDLKPANILLDRNFVSKVGDVGLSTMIQTDLLSTKFTMYKQTSPVGTLCYIDPEYQRTGMLSPKSDVYALGMIILQLLTAQPAIALTYTVEIAMENNDDDELIQILDKKAGGWPMEETRKLAALALHCTEIRAKDRPDLEKQILPVLENLKKVAEKARKTIASAPKQPPSHFICPLLKDVMKDPCIAADGYTYDRKAIEKWMEDYRSSPVTDSPLENMTLLPNHTLHAAIVEWCRRNQ
Length793
PositionTail
OrganismBrassica oleracea var. oleracea
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.06
Grand average of hydropathy-0.436
Instability index44.91
Isoelectric point6.41
Molecular weight88817.28
Publications
PubMed=24916971

Function

Annotated function Functions as an E3 ubiquitin ligase. 
ECO:0000256	ARBA:ARBA00003861
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02991
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     134.34|      46|      52|     168|     217|       1
---------------------------------------------------------------------------
  168-  217 (63.55/55.68)	ISNYVSNlcTVYVVSKGVYiLSKEK...LPSASDTERNEILRDtGSERSSSCS
  223-  271 (70.79/45.06)	ISDAMSS..TNALKSKSLG.LSNKRlqhLPTIVRGVSGRVETD.SDETRSVCS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     117.66|      38|     138|     490|     528|       2
---------------------------------------------------------------------------
  490-  528 (65.53/52.04)	LVL.LLGACPE.SGTLVYEY.MENGSlEDRIFQVNNSQPLPW
  628-  668 (52.12/35.96)	IILqLLTAQPAiALTYTVEIaMENND.DDELIQILDKKAGGW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     162.78|      43|      44|     355|     398|       3
---------------------------------------------------------------------------
  303-  344 (46.71/27.67)	..ENVT..DPGEDYFTDD.QDTRQEITKLRDELRQ.AQEMyAVAQvET
  355-  398 (61.28/43.37)	KlEDLTLKDQGTKGLAEK.ETQKKRMEEKETAQRR.EAEM.KVAR.EA
  401-  445 (54.78/34.03)	K.EKLVESSLVAPKVAPKvQYQEFTWEEISTATSSfSQEL.KIGE.GA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     170.29|      56|      58|       5|      61|       4
---------------------------------------------------------------------------
    5-   61 (88.66/59.32)	FKNSYLEPK.PALPVSTGsNHASPSQS.LTIAVAISGS..TKSKNVLKWALKKFASEKNIV
   62-  121 (81.63/50.15)	FKLIHIHPKlTSIPTPSG.NIVSISEApEDVAATYRRQvmEETKETLLKPYKKMCERKKVV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02991 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DTERNEILRDTGSERSSSCSSGSGTISDAMS
2) IVRGVSGRVETDSDETRSVCSDAPEEVSKIETSYTFDDRKDGNSHISSNPEYENVTDPGEDYFTDDQDTRQEITKLRDEL
3) KDQGTKGLAEKETQKKRMEEKETAQRREAEMKVAREA
198
251
362
228
330
398










Molecular Recognition Features






MoRF SequenceStartStop




NANANA