<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02988

Description Uncharacterized protein
SequenceMVRFPSEDRHAPVNSTVVAIDKDKNSHYAVRWAVEHLFNLIDNRNMILVHVRLKNSNHGGNVNDELNKLFIPYRGYCARKGISMMEVILDDIDVANAILDYANNNLVNNIVLGSTYSKNPFARSLKFTKSHDVAASVLKSTPEFCSVYVISKGKVQSSRAAQRPITNTLAPPRAPTFHLQNLPDPDQDHHLPRGQRNGRNITPERYRPHENGFNAVRERHKSAANYDFNQPMGQRNFDEPDFGTRMMGSIDQSAHNFDIIGSTSSSDESVSQSNKDVEAEMRRLKIELKQTMDMYSSACKEALDAKQKANELNKWKLEETLRFEEARSAEEAALAVAETEKAKCKAAMEAAEKSQRMADLEGQRRKQAEMKARRESQEKDRAISALVQNDVRYRRYSIEEIEEATDRFASNRQIGEGGYGPVFEGTLDHTPVAIKVLRADAAQGKKQFNQEVEVLSCIRHPHMVLLLGACPEYGCLVYEFMENGSLEDRLFRRGNSPPLSWRKRFQIAAEIATALSFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPASVADTVTQYHMTSAAGTFCYIDPEYQQTGKLTTKSDVYSVGIMLLQIITAKSPMGLAHHVSRAISKGTFKDMLDPVVTDWPVEEAMAFAKLCLKCAELRKKDRPDLGKDIVPELVRLRNFGMDKESGPKLGNRRTSSFILLPLDHQHFGNMTISEIEKHRIQSKIIKMGLIIMVMVMGILVASSPSHQTDVLTPLCISECSTCPTICSPPPSKPSPSTSPPPSPSLPSSSPLPQPPPSPSLPSSSPPPPPRKHSPPAVSPPPLITVIQPPPPRFDYFQSTPPPPPLASDVKGSPPSPPSPKGQPRGQQDPNPYPYFYFYTASNATSLFSSSFLTSLFYFLYLFSLTLR
Length905
PositionTail
OrganismBrassica oleracea var. oleracea
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.07
Grand average of hydropathy-0.478
Instability index56.45
Isoelectric point8.80
Molecular weight100939.95
Publications
PubMed=24916971

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02988
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     225.34|      36|      37|     792|     828|       1
---------------------------------------------------------------------------
  737-  765 (34.26/10.69)	......LVASSPSHQTDVLTPLCISECSTCPTICS.
  766-  793 (58.07/21.49)	PPPSKPSPSTSPPPSP...SLPSSSPLP.....QPP
  794-  827 (65.65/27.80)	..PSPSLPSSSPPPPPRKHSPPAVSPPPLITVIQPP
  829-  849 (28.16/11.63)	..PRFDYFQSTPPPPP............LASDVKG.
  850-  871 (39.20/11.20)	SPPSP..P..SPKGQPRGQQDP..NPYP........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     127.85|      35|      36|     163|     197|       2
---------------------------------------------------------------------------
  163-  197 (66.87/34.97)	RPITNTLAPPRAPTFHL...QNLPDPDQDHHLPRGQRN
  199-  236 (60.98/31.27)	RNITPERYRPHENGFNAvreRHKSAANYDFNQPMGQRN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.34|      24|      25|     332|     355|       3
---------------------------------------------------------------------------
  332-  355 (37.45/24.93)	AALAVAETEKAKCKAAMEAAEKSQ
  358-  381 (37.89/25.30)	ADLEGQRRKQAEMKARRESQEKDR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     106.99|      24|      25|     655|     678|       5
---------------------------------------------------------------------------
  652-  675 (38.60/25.42)	CAELRKKDRPDLGKDIVPELVRLR
  676-  693 (29.41/17.50)	NFGMDKESGPKLGNR......RTS
  694-  717 (38.99/25.76)	SFILLPLDHQHFGNMTISEIEKHR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.11|      12|      25|     491|     502|       6
---------------------------------------------------------------------------
  491-  502 (24.89/12.57)	FRRGNSP.PLSWR
  517-  529 (19.22/ 8.10)	FLHQTKPePLVHR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02988 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) CKAAMEAAEKSQRMADLEGQRRKQAEMKARRESQEK
2) CSPPPSKPSPSTSPPPSPSLPSSSPLPQPPPSPSLPSSSPPPPPRKHSPPAVSPPPLIT
3) PPPRFDYFQSTPPPPPLASDVKGSPPSPPSPKGQPRGQQDPNPY
4) RAAQRPITNTLAPPRAPTFHLQNLPDPDQDHHLPRGQRNGRNITPERYRPHENGFNAVRERHKSAANYDFNQPMGQRNFDEPDFGTRMMGSIDQSAHNFDIIGSTSSSDESVSQSNKDVEAEMRRLKIE
344
764
827
159
379
822
870
287










Molecular Recognition Features






MoRF SequenceStartStop




1) NPYPYFYFYT
868
877